Zingiber officinale (ginger): 122055914
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Entry
122055914 CDS
T08725
Name
(RefSeq) rRNA 2'-O-methyltransferase fibrillarin 1-like
KO
K14563
rRNA 2'-O-methyltransferase fibrillarin [EC:2.1.1.-]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
122055914
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
zof03009
]
122055914
Ribosome biogenesis [BR:
zof03009
]
Eukaryotic type
Sno RNPs
Box C/D snoRNPs
122055914
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fibrillarin
GCD14
PCMT
Methyltransf_31
Motif
Other DBs
NCBI-GeneID:
122055914
NCBI-ProteinID:
XP_042473537
LinkDB
All DBs
Position
3B:12077379..12081342
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AA seq
312 aa
AA seq
DB search
MRPPRGGGSFRGRSDGGGGRGRGRGFGGRGGGAEGRGGGRGRGGGRGGRGGSGRGGGRGG
GRGGGMKGGSKVVVQPHRHDGVFLAKGKEDALCTKNMVSGESVYGEKRVSVQNEDGTKVE
YRIWNPFRSKLAAAIIGGVDNIWIAPGTRVLYLGGASGTTVSHVSDIVGPTGVVYAVEFS
HRSGRDLVNMAKKRTNVIPIIEDARHPARYRMLVGMVDVIFSDVAQPDQARILALNASYF
LKNGGHFVISIKANCIDSTVPSEAVFAQEVKKLQAEQFKPSEQVTLEPFERDHACVVGGY
RMLKKQKVASER
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgaggcctccaaggggcggtggtagcttcaggggccggagcgatggtggaggagggaga
ggcagggggagaggattcggaggtcgaggcggtggggcagaaggccgtggtggtggaagg
ggccgtggaggcggacgaggaggtaggggaggaagcggccgtggtggaggccgcggcgga
ggccggggcgggggtatgaagggcgggagcaaggttgttgtccagccacaccggcatgat
ggagttttcctggctaaagggaaagaagacgcgctctgcacgaagaacatggtctctggt
gaatctgtttatggcgagaagcgagtttctgttcagaatgaggatgggactaaagttgag
tacaggatatggaatccgttccggtcaaaacttgcagcagctataattggtggcgtggac
aacatttggattgctcctggcactcgtgttctgtatcttggtggtgcatcagggactaca
gtgtctcatgtttctgacattgttggacctacaggagttgtgtatgctgtggaattctca
catcgaagtggtagagatcttgtaaatatggccaaaaagcgtactaatgtgattcccata
atagaggatgctagacatcctgctagatataggatgttggttggcatggtggatgttatt
ttttcagatgtggctcagcctgatcaggcaagaatcttggctctgaatgcttcatacttc
ttgaagaatggtggacattttgtgatttcaattaaggccaactgcattgactccactgtt
ccttccgaggctgtttttgcccaggaagtgaaaaagctccaggcagaacaattcaaacct
tcagagcaagtcactttggaaccatttgaaagggaccatgcctgtgttgttggtggctat
cgcatgcttaagaaacagaaagttgcctctgaaagataa
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