Zingiber officinale (ginger): 122055936
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Entry
122055936 CDS
T08725
Name
(RefSeq) serine/threonine-protein kinase VPS15-like isoform X1
KO
K08333
phosphoinositide-3-kinase, regulatory subunit 4 [EC:
2.7.11.1
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04136
Autophagy - other
zof04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
122055936
04136 Autophagy - other
122055936
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
zof01001
]
122055936
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122055936
Enzymes [BR:
zof01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
122055936
Protein kinases [BR:
zof01001
]
Serine/threonine kinases: Other
VPS15 family
122055936
Membrane trafficking [BR:
zof04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
122055936
Autophagy
Autophagosome formation proteins
PI3K complex
122055936
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PIK3R4-like_middle
Pkinase
WD40
WD40_Prp19
Beta-prop_WDR5
Beta-prop_WDR3_1st
Beta-prop_THOC3
WDR55
Beta-prop_IFT122_1st
WD40_WDHD1_1st
Beta-prop_NOL10_N
HEAT
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
PK_Tyr_Ser-Thr
EIF3I
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
Beta-prop_WDR36-Utp21_2nd
WDR90_beta-prop_4th
PPFR1_M
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_EML_2
Cohesin_HEAT
WD40_Gbeta
NBCH_WD40
Beta-prop_WDR41
APH
Vac14_Fab1_bd
Cnd3
TCAD9
Beta-prop_Vps41
Motif
Other DBs
NCBI-GeneID:
122055936
NCBI-ProteinID:
XP_042473564
LinkDB
All DBs
Position
3B:12961251..12980982
Genome browser
AA seq
1545 aa
AA seq
DB search
MGNKIARTTQVSASEYYLHDLPSSYNLVLVELLGRGRFFKSILCKHDEGLVLVKVYFKRG
EPLDLREYERRLAQIRDIFQSVQHPHVWPFQFWLETDKAAYLLRQYFFSNLHDRLSTRPF
LSLIEKKWLAFQLLCAVEQSHNKGVCHGDIKCENVLVTSWNWLYLADFASFKPTYIPDDD
PSDFSFFFDTGGRRRCYLAPERFYDHGGESPVVPDAPLKPSMDIFSLGCVIAELFLEGQP
LFELSQLLAYRRGQYDPCQCLEKIQDEGVQKMILHMIQLNPNARLSSQSYLQNYASSIFP
SYFSPSLHKFFSYLVPLDSDARVAAIERAFHKIHAQMMSVRSSDDVIIDSSASPKLTDKE
GFQNIKGATQGMLLARGDARSRSRKSTIAGQVQLVGDITSLLRNVEQINHSAHSDVTQKN
ATILSTNDSDTDCTRFSKQSRTLKNQPSNDLQGHKQKDFLFLRNIFKGELDSLMDAYDSQ
TDTYRMPSFPRSGDKNSCDGMVLIASLVCSCIRSVKQPQLRRAGLLLLKTTSLYTDDEDR
LQHVLPYVIAMLSDPAAIVRCAALETLCDILTLVQDFPPSDAMIFPEYIFPMLSMLPDDP
EESVRICYASNISKIALSSYRFLIQAETIAGGGPLGKPTIAQKSQPLIMESPSKQRGYRI
DSQLMQLRRLLAEIVQELVMGPKQTPNVRRALMQDIGHLCYFFGQKHSNDFLLPILPAFL
NDRDEQLQSAFYKHIIFFCYFVGQVSVEEYLLPYIEQALSDEMEVVIVNGLDCLSILCKS
GFLRKRTLLGLIEKVFPLLCYPIYWVRRSAVTFIAASSKSLGPVDSHVYLSPVLLPFLDR
VPTSLSSETSLLSCLKPPVSKVIYHQVLENARSSDMLERQRRIWYNSSTYSNQLETIEHT
RKVSGEVKSNNISCKRESDLQSGKYANSTTLNASLPVVEDVAVRTGTSFQISGSMDIRDS
VYLEKTQFSAFTSPQVTAANTSLCDVPTDGIPLYYVSLNKLASGIGPESSCQWNPKGVAA
SSMRLEPLDKPFGLSNSVPPKLVSSSFLNISTNIKQVQKQADVVSRDSEQSAFLTSKFQD
ITVYDALKGSSLNDASQSELSGLSTFARASSVPDIGWKPRGVLVAHLQEHKSSVNDVTVS
NDHTFFVSASDDSTVKIWDTRKLEKDISFRSRLTYSLDGCRALCTAMLRGTAQVVVGASD
GTIHLFSVNYISRGFGNVIEKYSGIADIQNRKIGEGAILSVLNCSSIDSSISQTVLFTTQ
RCGVHLWDTRANSDAWTFKAVPDEGYVSSLVMGQCGNWFVSGSSRGVLTLWDLRFLLPVN
SWQYPMGCPVEKLCLLIPPLNSVSAMTRPLVYVAAGSNEVSLWNAENGSCHQVLRVASGE
HEGESTHFSLATERPSRKQSSQFDGKRNINSKYRIDELNEPAPRLQGIRSLLPLPGGDLL
TGCADLTIRYWDHTSPEHSYCVCGPLTKGVGNDGYYDIRSRFGVQIVQQEMNKRSTKLTQ
KTFLSTAATDSAGCHRDSVLSLASLKLSQRVLISSSRDGAIKVWK
NT seq
4638 nt
NT seq
+upstream
nt +downstream
nt
atggggaataagatcgcaaggacgacccaggtgtccgcgtcggagtattacctccacgac
cttccttccagttataatctggtgctagtggagctcctaggccgtggacgcttcttcaaa
tccatactctgcaagcacgacgagggcctagtcctcgtcaaggtctatttcaagcgcggc
gaacccctcgacctcagggaatacgagaggaggttggctcagattagggatatcttccaa
tccgtgcagcatcctcatgtttggccattccaattctggctggaaactgacaaggcggct
tatcttttgaggcaatacttcttcagcaaccttcatgatcggttgagtaccagacccttc
ctcagccttattgagaaaaaatggctagcatttcagttactttgtgcagtggagcagagt
cacaataaaggagtttgccatggtgacatcaagtgtgagaatgtcctagtcacctcttgg
aattggttatatcttgctgactttgcgtctttcaagccaacatatataccagatgatgac
ccttctgatttttcattcttctttgacacgggtgggagaaggcgatgttatcttgcacct
gagaggttttatgatcatggaggtgagtcacctgttgtaccagatgcaccattaaaacca
tcgatggacattttctccttgggatgtgttattgctgaactttttttggagggacaacca
ttattcgagttatcccagctactggcatatcggcgagggcaatatgacccttgtcagtgc
ctagaaaagatacaagatgaaggtgttcagaaaatgatacttcatatgattcagttaaat
ccaaatgcaaggttatcaagtcaaagttacttgcaaaattatgcatcttcaatatttcca
agctatttctcaccatcccttcacaaattcttctcttatttggttccgcttgattcagat
gcaagggttgcagcaattgaaagagcattccataagattcatgcacaaatgatgagtgtc
aggtcatcagatgatgtcattattgactcatctgcatctcccaaactcacagacaaagaa
ggttttcaaaatatcaaaggtgcgactcaaggtatgcttttggctagaggggatgcaaga
agcagatcaaggaagagtacaattgcaggccaggttcagcttgttggagatatcacttca
ctcttgaggaatgtagaacaaataaatcattctgcgcacagtgatgtaacacagaagaat
gctacaatcttgtctactaatgattctgatactgactgcactagattttctaagcaatca
aggaccttgaagaatcagccatcaaatgatctccaagggcacaagcagaaagattttcta
tttctaagaaacatctttaaaggtgagctggactctttgatggatgcttatgatagccag
acagatacataccgcatgccatcttttccacggtcaggtgacaaaaacagttgcgatggc
atggtcctgattgcatcattagtatgttcttgcataagaagtgtgaaacagccacaactc
agaagggctggtctcctcctactgaagaccacttccttgtacactgatgatgaagatcgt
ctacaacatgtccttccatatgttattgcaatgctttctgatccagctgctattgttcgc
tgtgctgctcttgaaacattgtgtgacattttaactcttgtccaagatttccctcctagt
gatgcaatgatttttcctgagtatatatttccaatgctttccatgcttcctgatgatcca
gaggagagtgttagaatttgttatgctagtaatatttctaagattgcattgtcttcttat
agatttttaattcaggctgagactatagctggtggagggcctctaggtaaaccaactata
gcacaaaaatcacaacctcttattatggaatcaccaagtaagcaacgaggctacagaatt
gacagtcagcttatgcaattaaggagattgttagctgaaattgtgcaagagctggtaatg
ggtccaaaacaaactccaaatgtccgtcgagctcttatgcaggatattggccacctatgt
tacttcttcggtcagaagcatagtaatgatttcctattgcccattcttccagcatttctc
aatgatcgagatgagcagcttcaatcagctttctataaacatataatttttttctgctat
tttgttggccaagtgagtgttgaggaatatcttttaccatacattgagcaggctttaagt
gatgaaatggaggttgtaattgtgaatggtttggattgtttgtccatattatgcaaaagt
ggtttcctacgaaaaaggacgcttcttgggttgattgagaaagttttccctttgttatgt
tatccaatctattgggttagaagatcagccgttactttcattgctgctagtagcaagagt
ttggggccggtagattcccatgtttatctttctccagtcttactcccttttttagacagg
gtgccaacttctttatcttctgaaacatctctactttcatgcctgaagcctccagtctct
aaagtaatataccatcaagttctggaaaatgcaaggagttctgacatgttggaaagacaa
agaaggatatggtataattcatcaacatattcaaatcagttggaaactattgaacacact
aggaaggtttcaggagaagtgaaatccaataatatttcttgcaaaagagaatcagattta
caaagtggaaaatatgccaacagtacaacactgaatgcatctttacctgttgtcgaggat
gttgctgtaagaacagggacatcttttcagatctctggctcaatggatataagagattct
gtttatttggaaaaaacacaattttctgcattcacatctccgcaggtaacagcagctaat
acttctctttgtgatgtgcctactgacggcattcccttgtactatgttagtctcaataaa
cttgcatctggtattggtcctgaatcttcatgtcagtggaaccctaaaggtgtcgctgct
tcaagcatgcggttggaacctctcgacaagccatttggcttatctaattcagttccaccc
aaactggtttcaagctcttttttaaatatcagcaccaacatcaaacaagttcaaaagcaa
gctgatgttgtatcccgggactctgagcaatctgcatttcttaccagtaagtttcaggat
ataactgtttacgatgctttgaagggaagctcattgaatgatgcctcacagtccgagtta
agtggattatctacctttgcaagagcatcttcggttcctgatataggatggaaaccacgt
ggagttctggttgcacatctccaggagcacaaatcttctgtgaatgatgtaactgtatca
aatgaccacacttttttcgtaagtgcatctgatgattcgactgttaagatatgggatact
aggaaattggaaaaggacatctcttttaggtctaggttaacatattctctagatggttgt
cgagctttatgtacagctatgcttcgaggcactgcccaagtggttgttggtgcaagcgat
ggaacgattcatttattttctgtaaattacataagtagagggttcggtaatgtaatagaa
aagtattctggtattgctgatatccagaacagaaaaattggtgaaggtgcgattcttagt
gtgttgaactgctctagtatagatagtagcattagtcagactgttttattcaccacccag
agatgtggagttcatctctgggatacaagggcaaattctgatgcctggacatttaaagct
gttccagatgaaggatatgtctcatctcttgtaatgggtcaatgtggaaactggtttgta
tctggttcttctagaggtgttctgacactctgggatctcaggttccttctgccagtgaac
tcatggcaatatcccatgggttgccctgtggagaagctatgcttactaattccaccattg
aactcagtgtctgctatgacaaggccattagtttatgttgctgctggaagtaatgaagtc
tccctctggaatgctgagaacggaagttgtcatcaggtgttgagagtagcaagtggtgag
cacgaaggtgaatcaacccatttttctctagcgacagagaggccttctagaaagcaaagt
tctcaatttgatgggaaaagaaatatcaattccaaatataggattgatgagttgaatgaa
ccagcccctcgtcttcagggtattcgatcattgcttccattacctgggggagatctgttg
actggatgtgcagatttgacaatacgttactgggatcatacaagtcctgagcatagttat
tgtgtctgtggtccattgacaaaaggcgtaggaaatgatgggtactatgatattaggtct
agatttggtgtgcaaattgtgcagcaggagatgaacaagcggtcgactaagttgactcag
aagacattcctttccacggcagccactgattctgctgggtgtcaccgtgactctgtgctt
tcgttagcatctctcaagttgagccaaagggttttgatctcaagtagcagagatggtgca
atcaaggtatggaaatag
DBGET
integrated database retrieval system
