Zingiber officinale (ginger): 122055966
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Entry
122055966 CDS
T08725
Name
(RefSeq) ABC transporter B family member 4-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122055966
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zof02000
]
122055966
04147 Exosome [BR:
zof04147
]
122055966
04090 CD molecules [BR:
zof04090
]
122055966
Enzymes [BR:
zof01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
122055966
Transporters [BR:
zof02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
122055966
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122055966
CD molecules [BR:
zof04090
]
Proteins
122055966
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_29
AAA_16
AAA_22
RsgA_GTPase
Zeta_toxin
AAA_5
AAA_15
AAA_21
AAA_30
DUF87
DUF815
G-alpha
DEAD
DLIC
Motif
Other DBs
NCBI-GeneID:
122055966
NCBI-ProteinID:
XP_042473610
LinkDB
All DBs
Position
3B:14728749..14748487
Genome browser
AA seq
1225 aa
AA seq
DB search
MLLGSLGAAGNGISLPLMTVLFGNLIQSFGGASNGHDTLHQVSKVSLEFVYLAIGAGIAS
FLQVACWMATGERQSARIRNLYLETILRQEIAFFDKETNTGEVIERMSGDTVFIQDAMGE
KVGKFIQLTSTFFAGFIVAFAQGWLLTLVMLCSIPPLVITGGIMADIVAKMASRGQAAYG
EAATVVQQTIGSIRTVASFTGEKLAVKKYDKSLVRAYNASVQEGLVAGLGLGTLMLFMFC
GYSLGIWYGAKLILHKGYTGGKVINVIFAIQAGSFSLGQIAPCMTAFAAGQAAAYKMFET
INRKPEIDAYDPKGRRLDDIQGDIEFKDVYFSYPARPDEQIFRGFSLSIQKGTTVALVGE
SGSGKSTVVSLIERFYDPQVGEVLIDGINLKELQLSWIRGKIGLVSQEPVLFATSIKHNI
AYGKNNATAEEIRAATELANAAKFIDKLPQGLDTMVGEHGTQLSGGQKQRVAIARAILRD
PRILLLDEATSALDAESERIVQEALDRVMANRTTVIVAHRLSTIRNADSIAVIHRGSIVE
KGSHVELLKNPAGAYSQLIRLQEVNQAQLTAHKSDSEKSDGGISSGQYTSKKLSLNRSIS
RGSSGRHSSHSFQAPFGLAMGFDAQDTSDNVDPESPIEHSKEVPVLRLAYLNRPEIPILI
LGLFAAIVDGVIFPLFSIFLSNVINSFYQPPHKLKKDSNFWSLMFLIVGGVSLFAISART
YFFGVAGSKLIRRIRLMTFEKVVSMEIKWFDNPENSSGAIGARLSADAAVVRSLVGDALA
LIVQNITTLVAGLAIAFIANWQLSLIVLALVPLLGANGYIQMKFIKGFSKDAKVMYEEAS
QVANDAVGGIRTVASFSAEEKVMGIYKQKCEGPVRKGIRQGLISGTGFGVSFFLLFCVYG
ASFYAGARLVESGKTTFDKVFQVFFALAMAAVGISQSSSYAPDSSKAKSASASIFAILDR
KSKIDPSNDSGMTLENSKGNIELQHVSFRYPTRPDIQIFQDLCLTIPSGKTVALVGESGS
GKSTVVSLLQRFYDPDSGEILLDGIEIKKLQLRWLRQQMGLVSQEPVLFNDTIRANIAYG
KEGNVTEAEIIAAAELSNAHKFISSLHKGYDTLVGERGVHLSGGQKQRVAIGRAIVKDPK
ILLLDEATSALDAESERVVQDALDQVMVNRTTIVIAHRLSTIKGADVIAVVKNGVIVEKG
KHETLLSIKGGAYASLVALHMSMAH
NT seq
3678 nt
NT seq
+upstream
nt +downstream
nt
atgctgttgggttcgcttggtgccgcaggaaatggaatttctctaccccttatgacggtg
ctcttcggaaatttgatccaatcctttggcggagcttcgaacggacatgatacgcttcat
caagtctccaaggtatcactggaatttgtctacctagccattggagcaggcattgcgtct
tttcttcaggtggcttgctggatggctactggggaaaggcaatcagcccgaataaggaac
ttgtatcttgaaaccatattacgacaggaaattgcattctttgacaaggaaacaaataca
ggtgaagttattgagaggatgtctggggatactgtttttattcaagatgccatgggcgag
aaggttggcaaatttattcagctaacatcaactttctttgctggattcattgttgcattt
gcacaagggtggctgctgaccttggtcatgctgtgctctattccccctctggtgattact
ggtggaatcatggccgatatcgtggccaaaatggcatcacgcggacaagcagcttatgga
gaagctgcaactgttgttcaacaaaccattggttcaattaggacagttgcttcctttact
ggggaaaaactagcagtaaagaagtatgataagtctttagtaagggcctacaatgccagt
gttcaagaaggtctggtagctggtttaggtcttggaacgctcatgctcttcatgttttgt
gggtactccttgggaatatggtatggagcaaaactgatacttcataagggttacactggt
ggaaaggtcatcaacgtgatatttgcaatccaagcaggttccttctcattaggccagata
gcaccatgcatgacagcttttgcagcaggacaagctgctgcttataagatgtttgagaca
atcaaccgaaagccagaaattgatgcttatgatcccaaaggaaggaggcttgatgatatt
caaggggacattgaatttaaagatgtttattttagttatcctgccagaccagatgaacaa
atctttcgtggtttctctctaagcattcagaaaggaacaactgttgcattggttggtgag
agtggaagtggaaaatcaacagttgtgagtttgatagagagattttatgatccacaggtt
ggtgaagttctcattgatggaataaacctcaaggaacttcaactcagttggattagaggg
aaaattgggcttgtgagtcaggaaccagttctttttgccactagcattaaacataacata
gcttatgggaaaaataatgcaactgctgaagaaatcagagcagcaacagagcttgcaaat
gctgctaaattcatagacaaattgcctcagggccttgacactatggttggcgaacacgga
acacaactatctggaggtcaaaagcaaagagttgcaattgccagagcaattttgagagat
cctcgaattttacttttggatgaagctacgagtgcattggatgcagagtcagaaagaata
gtgcaggaagcacttgacagggtcatggcaaatcgtactactgttattgttgctcatcga
ttgagcactattaggaatgctgattccattgctgttatacatcgaggatcaattgttgaa
aaaggttcgcatgttgagctactaaagaatcctgctggagcttatagccaactcataagg
cttcaagaagtgaaccaggcccagcttactgcacacaaatctgattcagaaaaatctgat
ggggggatatcttcaggtcagtacacgagcaagaaattgtccttgaaccgctccattagc
cgtggatcatcaggcagacatagcagccactcatttcaagctccatttggtttggccatg
gggtttgatgcccaagatacatctgacaatgtggatcctgaaagtcctattgaacattca
aaagaagtaccagtcctccgcttagcatatcttaatagaccagagattcctatattgata
cttggtttatttgctgccattgttgatggtgtcatatttcccctgttttcaatattctta
tcaaatgtaatcaactcattttaccagcctccacacaagctcaagaaggactccaacttt
tggtcattaatgtttctgatagttggtggggtttctttgtttgccatttcagctagaaca
tacttctttggtgtggcaggatcaaaattgattaggaggattaggctaatgacatttgag
aaagtcgttagcatggaaataaaatggtttgataatcctgagaactccagtggtgcaatt
ggggcaaggctatcagcagatgcagctgtagtcaggagtcttgtaggagatgcacttgca
ttgatcgttcagaacatcacaacattggttgctggcttggcgattgcttttattgccaat
tggcaactttcattgattgtcttggctttggtacctctcttgggtgccaatggatacata
cagatgaaatttatcaagggatttagtaaagatgcaaaggtgatgtacgaggaagcaagt
caagttgcaaatgatgctgtgggaggtatcagaacagttgcttcattttctgcagaagag
aaagtgatgggaatatacaagcagaaatgtgaaggccctgtgagaaaaggaattaggcaa
gggttaatcagtggtacaggatttggagtttccttctttttgttgttttgtgtatatgga
gctagtttttatgctggagcacgactggtggagagtggaaagactacttttgacaaagta
tttcaggtattttttgctcttgcaatggcagcagttgggatttctcaatcaagttcctat
gctccagattcttcaaaagccaaatctgcttctgcttcaatttttgctattctcgatcgg
aaatctaaaatagatccaagcaatgattctggaatgacattggaaaattcgaaaggaaac
attgagctacaacatgtcagcttccgttaccctactcgtccagatatccagattttccag
gatctatgcttgacaatcccttctggaaagacagtcgcacttgtaggagagagcggtagt
gggaaatcaactgttgtatcactgttgcaaagattttatgatccagattcaggtgaaata
ctgctagatggcatcgaaattaaaaagttacaactgaggtggctgagacagcagatgggc
ttggtgagccaagaaccagttctatttaacgatactatccgagctaatattgcttatgga
aaggaaggaaatgtgactgaagctgagatcatagctgcagctgagttatccaatgcccac
aagttcattagcagtttgcacaagggctatgatacattagttggagaacgaggagtccat
ttatcaggcgggcaaaagcaacgtgttgcgattggacgtgctatcgtgaaggatccaaaa
attctgttacttgatgaagcaactagtgcactagatgctgaatctgaaagggtggtgcaa
gatgcattagaccaagtcatggttaatcgaaccactattgtcatagcacatagattatct
accataaagggtgcggatgtgattgctgtggttaagaatggagtgatagtagagaaaggg
aagcatgagaccttattgagcatcaagggaggtgcctatgcctcccttgtagcacttcac
atgagcatggcacattga
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integrated database retrieval system
