Zingiber officinale (ginger): 122055969
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Entry
122055969 CDS
T08725
Name
(RefSeq) ABC transporter B family member 4-like isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
122055969
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
zof02000
]
122055969
04147 Exosome [BR:
zof04147
]
122055969
04090 CD molecules [BR:
zof04090
]
122055969
Enzymes [BR:
zof01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
122055969
Transporters [BR:
zof02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
122055969
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
122055969
CD molecules [BR:
zof04090
]
Proteins
122055969
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
AAA_16
AAA_29
AAA_22
Zeta_toxin
RsgA_GTPase
AAA_5
DUF87
AAA_25
DUF815
G-alpha
AAA_30
DEAD
DLIC
AAA_15
Motif
Other DBs
NCBI-GeneID:
122055969
NCBI-ProteinID:
XP_042473612
LinkDB
All DBs
Position
3B:14931334..14948758
Genome browser
AA seq
1288 aa
AA seq
DB search
MAAEGKENHGSSSNLEADETTTNSPEEQQNERESRKDKKQDQNTFTVPLYKLFSFADSTD
YVLMLLGSLGAAGNGVSLPLMTVLFGNLIQSFGGASNGHDTLHQVSKVALEFVYLAIGAG
IASFLQVACWMATGERQSARIRNLYLETILRQEIAFFDKETNTGEVIERMSGDTVFIQDA
MGEKVGKFIQLTSTFFTGFIVAFAQGWLLTLVMLCTIPPLVITGGIMANIVAKMASRGQA
AYGEAATVVEQTIGSIRTVASFTGEKLAVKKYDKSLVRAYNASVQEGLVAGLGLGMLMLF
MFCGYSLGIWYGAKLILHKGYTGGKVINVIFAILTGSFSLGQIAPCMTAFAAGQAAAYKM
FETINRKPEIDAYDPKGRRLDDIQGDIEFKDVYFSYPARPDEQIFRGFSLSIQKGTTVAL
VGESGSGKSTVVSLIERFYDPQVGEVLIDGINLKELQLSWIRGKIGLVSQEPVLFATSIK
HNIAYGKNNATVEEIRAATELANAAKFIDKLPQGLDTMVGEHGTQLSGGQKQRVAIARAI
LKDPRILLLDEATSALDAESERIVQEALDRVMENRTTVIVAHRLSTIRNADSIAVIHRGS
IVEKGSHVELLKNPAGAYSQLIRLQEVNQAQVTAHKSDSEKSDGGISSGQYSSKKLSLNR
SISRGSSGRHSSHSFQAPFGLAMGFDAQDTSDNADPESTIEHSKEVPVLRLAYLNRPEIP
ILILGSFAAIVNGVIFPLFSILLSNVINAFYQPPHKLKKGSNFWSLMFLIFGGVSLFALP
ARTYFFGVAGSKLIRRIRLMTFEKVVSMEIEWFDNPENSSGAIGARLSADAAVVRSLVGD
ALALIVQNITTLVAGLAIAFIANWQLSLIVLALVPLLGANGYIQMKFMKGFSKDAKVMYE
EASQVANDAVGGIRTVASFSAEEKVMGIYKQKCESPMRKGIRQGLISGTGFGVSFFLLFC
VYGASFYAGARLVESGKTTFDKVFRVFFALAMAAIGISQSSSLAPDSSKAKSASASVFAI
LDRKSKIDPSNDSGMTLENLKGNIELQHVSFRYPTRPDIQIFQDLCLTIPSGKTVALVGE
SGSGKSTVVSLLQRFYDPDSGEILLDGIEIKKLQLRWLRQQMGLVSQEPVLFNDTIRVNI
AYGKEGNVTEAEIIAAAELSNAHKFISSLHKGYDTLVGERGVHLSGGQKQRVAIGRAIVK
DPKILLLDEATSALDAESERVVQDALDQVMVNRTTIVIAHRLSTIKGADVIAVVKNGVIV
EKGKHETLLSIKGGAYASLVALHMSVAH
NT seq
3867 nt
NT seq
+upstream
nt +downstream
nt
atggccgccgaaggtaaagagaatcatggatcctctagcaatctggaggcggatgaaacc
accactaattctccagaggagcaacaaaacgaacgagagagtcggaaggacaagaaacaa
gatcagaacacgttcactgtgcctctctacaaattgttctcctttgcagactccacagat
tacgtcttgatgctgttgggttcgcttggtgccgcaggaaatggagtttctctacccctt
atgacggtgctcttcggaaatttgatccagtcctttggcggagcttcgaacggacatgat
acgcttcatcaagtctccaaggtagcactggaatttgtctacctagccattggagcaggc
attgcgtcttttcttcaggtggcttgctggatggctaccggggaaaggcaatcagcccga
ataagaaacttgtatcttgaaaccatattacgacaagaaattgcattctttgacaaggaa
acaaatacaggtgaagttattgagaggatgtctggggatactgtttttattcaagatgcc
atgggcgagaaggttggcaaatttattcagctaacatcaactttctttactggattcatt
gttgcatttgcacaagggtggctgctgaccttggtcatgctgtgcactattccccctctg
gtgattactggtggaatcatggccaatattgtggccaaaatggcatcacgcggacaagca
gcttatggagaagctgcaactgttgttgaacaaaccattggttcaattaggacagttgct
tcctttactggggaaaaactagcagtaaagaagtatgataagtctttagtaagggcctac
aatgccagtgttcaagaaggtctggtagctggtttaggtcttggaatgctcatgctcttc
atgttttgtgggtactccttgggaatatggtatggagcaaaactgatacttcataagggt
tacactggtggaaaggtcatcaatgtgatatttgcaatcctcacaggttctttctcatta
ggccagatagcaccatgcatgacagcttttgcagcaggacaagctgctgcttataagatg
tttgagacaatcaaccgaaagccagaaattgatgcttatgatcccaaaggaaggaggctt
gatgatattcaaggggacattgaatttaaagatgtttattttagttatcctgccagacca
gatgaacaaatctttcgtggtttctctctaagcattcagaaaggaacaactgttgcattg
gttggtgagagtggaagtggaaaatcaacagttgttagtttgatagagagattttatgat
ccacaggttggtgaagttctcattgatggaataaacctcaaggaacttcaactcagttgg
attagaggaaaaattgggcttgtgagtcaggaaccagttctttttgccactagcattaaa
cataacatagcttatgggaaaaataatgcaactgttgaagaaatcagagcagcaacagag
cttgcaaatgctgctaaattcatagacaaattgcctcagggccttgacactatggttggc
gaacacggaacacaactatctggaggtcaaaagcaaagagttgcaattgccagagcaatt
ttgaaagatcctcgaattttacttttggatgaagctacgagtgcattggacgcagagtca
gaaagaatagtgcaggaagcacttgacagggtcatggaaaatcgtactactgttattgtt
gctcatcgattgagcactattaggaatgctgattccattgctgttatacatcgaggatca
attgttgaaaaaggttcgcatgttgagctattaaagaatcctgctggagcttatagccaa
ctcataaggcttcaagaagtgaaccaggcccaggttactgcacacaaatctgattcagaa
aaatctgatggggggatatcttcaggtcagtactcgagcaagaaactgtccttgaaccgc
tccattagccgtggatcatcaggcagacatagcagccactcatttcaagctccatttggt
ttggccatggggtttgatgcccaagatacatctgacaatgcggatcctgaaagtactatt
gaacattcaaaagaagtaccagtcctccgcttagcatatcttaatagaccagagattcct
atattgatacttggttcatttgctgccattgttaatggtgtcatatttcccctgttttca
atactcttatcaaatgtaatcaatgcattttaccagcctccacacaagctcaagaagggc
tccaacttttggtcattaatgtttctgatatttggtggggtttctttgtttgcccttcca
gctagaacatacttctttggtgtggcaggatcaaaattgattaggaggattaggctaatg
acatttgagaaagtcgttagcatggaaatagaatggtttgataatcctgagaactccagt
ggtgcaattggggcaaggctatcagcagatgcagctgtagtcaggagtcttgtaggagat
gcacttgcattgatcgttcagaacatcacaacattggttgctggcttggcgattgctttt
attgccaattggcaactttcattgattgtcttggctttggtacctctcttgggtgccaat
ggatacatacagatgaaatttatgaagggatttagtaaagatgcaaaggtgatgtacgag
gaagcaagtcaagttgcaaatgatgctgtgggaggtatcagaacagttgcttcattttct
gcagaagagaaagtgatgggaatatacaagcagaaatgtgaaagccctatgagaaaagga
attaggcaagggttaattagtggtacaggatttggagtttccttctttttgttgttttgt
gtatatggagctagtttttatgctggagcacgactggtggagagtggaaagactactttt
gacaaagtatttcgggtattttttgctcttgcaatggcagcaattgggatttctcaatca
agttccttagctccagattcttcaaaagccaaatctgcttctgcttcagtttttgctatt
ctcgatcggaaatctaaaatagatccaagcaatgattctggaatgacattggaaaatttg
aaaggaaacattgagctacaacatgtcagcttccgttaccctactcgtccagatatccag
attttccaggatctatgcctgacaatcccttctggaaagacagtcgcacttgtaggagag
agcggtagtgggaaatcaactgttgtatcactgttgcaaagattttatgatccagattca
ggtgaaatactgctagatggcatcgaaattaaaaagttacaactgaggtggttgagacag
cagatgggcttggtgagccaagaaccagttctatttaacgatactatccgagttaatatt
gcttatggaaaggaaggaaatgtgactgaagctgagatcatagctgcagctgagttatcc
aatgcccacaagttcattagcagtttgcacaagggctatgatacattagttggagaacga
ggagtccatttatcaggcgggcaaaagcaacgtgttgcgattggacgtgctatcgtgaag
gatccaaaaattctgttactagatgaagcaacaagtgcactggatgctgaatctgaaagg
gtggtgcaagatgcattagaccaagtcatggtcaatcgaaccactattgtcatagcacat
agattatctaccataaagggtgcggatgtgattgctgtggttaagaatggagtgatagta
gagaaagggaagcatgagaccttattgagcatcaagggaggggcctatgcctcccttgta
gcacttcacatgagcgtggcacattga
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