Zingiber officinale (ginger): 122056004
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Entry
122056004 CDS
T08725
Name
(RefSeq) long chain acyl-CoA synthetase 9, chloroplastic-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00061
Fatty acid biosynthesis
zof00071
Fatty acid degradation
zof01100
Metabolic pathways
zof01212
Fatty acid metabolism
zof04146
Peroxisome
Module
zof_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
122056004
00071 Fatty acid degradation
122056004
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
122056004
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
zof01004
]
122056004
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
zof04147
]
122056004
Enzymes [BR:
zof01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
122056004
Lipid biosynthesis proteins [BR:
zof01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
122056004
Exosome [BR:
zof04147
]
Exosomal proteins
Exosomal proteins of breast milk
122056004
Exosomal proteins of breast cancer cells
122056004
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
122056004
NCBI-ProteinID:
XP_042473666
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Position
3B:17608764..17632543
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AA seq
695 aa
AA seq
DB search
MNPYFVGILVPLIASFVFRRSTSEKKRGLPVVVGGEPGYAVRNHRFTSPMESFWEGVSTL
ADLFEQSCKRFPYKPLLGSRKLVVREMEVNQDGRSFEKLHLGNYEWISYAQAFKTVCSFA
SGMIQLGHIKNERVAIFADTRAEWFISLQACFRQNITVVTIYASLGEEALCHSLNETEVT
TVICGNKELKKLIAISGQLDSLKRVIYMDEDASEVSLAKKITSWTITSFIEVETMGMKKS
IDADLPLSSDIAVIMYTSGSTGLPKGVMMTHGNLLATVSAVMTIVPNLGTKDIYMAYLPL
AHILELAAENVMVAGGSSIGYGSPLTLTDTSNKIKKGTKGDASELRPTLMTAVPAILDRV
RDGVRKKVDTTGGLSKKLFDLAYGRRLAAINGSWMGAWGFEKVAWDLLVFKKVRSVLGGR
IRFLLSGGAPLSGDTQRFINICLGSPIGQGYGLTETCAGGTFSEYDDTSVGRVGAPLPCS
YVKLIDWTEGGYLITDSPMPRGEIVIGGPNVTPGYFKNEEKTNEVYKVDERGIRWFYTGD
IGRFHLDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALIQSPYVDNIMVYADPFHAYCVAL
VVAAQQGLEQWASKEGISYSDLVELCQKEETVKQVQESLFKAAKQARLEKFEIPAKIKLI
SEPWTPESGLVTAALKLKREVLRKTYADDLAKLYA
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgaacccatattttgttggcatcttggttccacttatagcttcatttgtatttcgaaga
tcaactagtgaaaaaaagcgagggctgccagttgttgttggtggtgagccgggatatgca
gttcgcaaccaccgtttcacatctccaatggagtcattttgggaaggggtctcaacactg
gctgatctttttgagcaatcatgtaaacgatttccgtacaagcctctacttggatctcgg
aagcttgtggtacgagaaatggaagtgaaccaggatgggagatcctttgagaaacttcat
cttggaaactatgaatggatcagttatgctcaagctttcaaaactgtttgcagttttgca
tctggtatgatccaactcggccacataaagaatgagcgcgttgcaatatttgctgataca
cgagctgaatggtttatttccttacaggcttgctttaggcagaatattacagttgttact
atatatgcttcactgggagaggaggctctttgccactcgttaaatgagacagaggtcaca
acagtgatttgtggaaataaggaactgaaaaaattgattgctataagtggacagcttgac
tctctaaaacgggtcatttatatggatgaggatgctagtgaggtttcattggctaagaag
attaccagttggaccatcacctcatttattgaagtagagactatgggtatgaaaaagtct
attgatgccgatctacccctttcttcagacattgcagtgataatgtataccagcggaagt
actggtctaccaaagggcgtgatgatgacccatggtaaccttctagcaacagtttcggct
gttatgactattgtcccaaatcttggcacgaaagatatttacatggcataccttccactg
gcccatattcttgagttggctgctgagaatgttatggttgctggaggaagttctattggc
tatgggtcacctttgactctaacagacacttctaacaaaataaagaaaggaacaaaagga
gatgcttcagagttgagacctacactaatgactgcggtgcctgccatccttgatcgtgtc
cgtgatggagtacggaaaaaggtagatactacaggagggttatccaagaaactttttgat
ttggcatatggtcgtaggttggcagccattaatggcagttggatgggtgcatggggtttt
gagaaggttgcatgggatcttcttgtcttcaaaaaggttcgatctgtattaggaggtcgc
atacgcttccttctctctggtggggctcctttatctggtgatactcaaagatttattaac
atatgtctcgggtcaccgatagggcaagggtatggtctgactgaaacttgtgccggtgga
acattttcagaatatgatgacacgtctgttgggcgtgttggtgctccactaccatgttca
tatgtgaagttaattgactggaccgaaggtggatatctaatcacagattcaccgatgcct
agaggggagattgttattgggggtccaaatgttactcctgggtatttcaagaatgaggag
aaaacaaatgaagtttacaaggttgatgagagaggtatccgatggttttacactggtgac
attggaaggttccatctggatggttgtctagagatcattgatcgtaaaaaggacatagtg
aaacttcagcatggtgaatatgtctctcttggaaaggttgaggcagctttgattcaaagc
ccctatgtggataacatcatggtgtatgctgatccttttcatgcgtattgtgttgcacta
gttgttgccgcacaacagggtttggaacaatgggcttcgaaagaaggaattagttacagt
gatcttgtggaattgtgccaaaaggaggaaacagtgaaacaagtgcaagaatcattattt
aaggcggccaaacaagcacgattggagaaatttgagatcccagctaagatcaagttgatt
tctgaaccatggactcctgagtccggtcttgtcactgctgcactaaaactcaagagagaa
gttttaaggaaaacatatgctgatgaccttgcaaagttatatgcttga
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