Zingiber officinale (ginger): 122056235
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Entry
122056235 CDS
T08725
Name
(RefSeq) long chain base biosynthesis protein 1b-like
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00600
Sphingolipid metabolism
zof01100
Metabolic pathways
Module
zof_M00094
Ceramide biosynthesis
zof_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
122056235
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
zof01007
]
122056235
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
122056235
Amino acid related enzymes [BR:
zof01007
]
Aminotransferase (transaminase)
Class II
122056235
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Cys_Met_Meta_PP
OKR_DC_1
Motif
Other DBs
NCBI-GeneID:
122056235
NCBI-ProteinID:
XP_042474019
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Position
1B:complement(46276905..46282467)
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AA seq
483 aa
AA seq
DB search
MAAAVISMTTAALDWVSVVFDAPLARAVVFGVHIDGHLVVEVLLIAVILFQLTRKSYKPP
KKPLTEKEIDDLCEEWVPESLHPPITEEMKVEPPTLESAAGPHTVIDGKKVVNFASANYL
GLIGNDKIIDSCVASLEKYGVGSCGPRGFYGTIDVHLDCETRIAKFMGTPDSILYSYGIS
TIFSVIPAFCKKGDIIVADEGVHWGVQNGLYLSRSTVVYFKHNDMTSLEGTLEKLTRGNR
QAEKIRRYIVVEALYQNSGQVAPLNEIMRLKEKYRFRVILEESHSFGVLGNTGRGLAEHY
GVSIEKIDIITAGMGNALATDGGFCIGSARVVDHQRLSSSGYVFSASLPPYLASAAVAAV
NYLEDNPTVLTTLRSNVSLLWKGLSDIPGLTIASDPSSPLVFLKLKKPTSSSKCDLELLN
KIAERALREDSVFVVSTKRSVLDKCHLPVGIRLFVSAGHTVSDIKKVSDSLRRVAALVLA
EHI
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggccgctgctgtaattagcatgaccactgcagcgctggattgggtatctgtggttttt
gatgctccgcttgcccgagctgttgtctttggtgttcacatagatggacacttagttgtt
gaagtgctacttatagctgtcatactgttccaactaacaagaaaaagttacaagccgccc
aagaaacccctaactgaaaaggaaatagatgatctttgtgaagaatgggttcctgaatcc
cttcatccgcctatcactgaggaaatgaaagttgagcctccaaccttagaaagtgctgca
gggccacacacggtaattgatggaaagaaagttgtgaattttgcttcggcaaactatcta
ggacttataggcaatgataagataattgattcatgtgttgcctcactagaaaagtatggc
gtcggttcttgtggtcctcgtggtttctatggaacaattgatgtccaccttgattgtgag
acgagaattgcaaagttcatgggtactccagattcaatactctactcttatggcatctca
accattttcagtgtcattccagcattttgtaagaaaggagacattattgttgcagatgag
ggtgttcattggggagtgcaaaatgggctttatctctcaagaagtactgttgtttacttc
aagcataatgatatgacatcactagagggcactttagagaaattgactcgtggaaatagg
caagcagaaaagattagacgctatattgttgttgaagcactttaccagaattctggtcaa
gttgccccattaaatgaaattatgcggctaaaagagaagtaccgctttcgggtcatattg
gaagaaagccattcctttggtgtacttggaaacactggacgaggtcttgctgagcattat
ggagtatcaattgagaagattgatataataactgctggtatgggaaatgcattggccacc
gatggggggttttgcattggaagtgccagagtagttgatcaccagcgtttgagtagctct
ggatacgtcttttctgcatctttacctccctatcttgcaagtgctgcagttgccgctgtg
aactacttagaggataatccaactgttctcacaacattaaggagcaatgtttctctgctc
tggaaagggttatcagatataccaggtttgacaattgcaagtgatccatcatcacccctt
gtcttcctaaaacttaaaaaaccaacgagttcctccaagtgtgacttggaacttctaaac
aaaattgccgaaagggcacttagggaagattctgtctttgttgttagcacaaaaaggtca
gttctggataagtgccatcttcccgttggcattcgcttatttgtttcggcaggtcacaca
gtatccgacatcaagaaagtttccgactccttgcgaagagttgcagccctggttctagct
gaacatatctaa
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