Zingiber officinale (ginger): 122056313
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Entry
122056313 CDS
T08725
Name
(RefSeq) AP-1 complex subunit gamma-2-like isoform X1
KO
K12391
AP-1 complex subunit gamma-1
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
122056313
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
zof04131
]
122056313
Membrane trafficking [BR:
zof04131
]
Endosome - Golgi transport
Others
AP-1 complex
122056313
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
Alpha_adaptinC2
INTS1_R4
Cnd1
Motif
Other DBs
NCBI-GeneID:
122056313
NCBI-ProteinID:
XP_042474149
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Position
3B:complement(31231427..31254382)
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AA seq
861 aa
AA seq
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MNAFSSPSRLRDLIRAARACKTAAEERAVVRKECAAIRSSINENDQFFRHRNLAKLMFIH
MLGYPTHFGQMECLKLIAAVGFPEKRIGYLGLMLLLDERQEVLMLVTNSLKQDLNHLNHY
IVGLALCALGNICSAEMARDLEPEVQRLFLSRDLDIKKKAALCSIRIIRKVPDLAENLMI
PAASLLKEKHHGVLISAVQLCITLCKVSDIPLEHLRKSCIKGLVQILKELSNSSYTPEYE
IAGVMDPFLQIRILKLMRLLGQGDVECSEYMTDILAQVATRTESHKNAGNAILYECVETI
MGIEATSGLRVLAINILGKFLSNRDNNIRYVALNMLMKAVSVDSQAVQRHKTTILECMKD
SDISIRKRTLELVFLLVNETNVKPLTRELIGYLEVSDQDFKGDLTAKICSIVKKFSQEKK
WYIDQMFKVLCIAGNYVKDDVLHSLIITISNALDIQGYCVRSLYKALQNHPDQGSLVQVA
VWCIGEYGELLVNNIKVSEVENTMNVTDSHAVDVIEASLKHHLSDITIQSMCLIALLKLS
SRFTSTSERIREIIIHHKGSVVLELQQRAIEFNCIIQRHQNIKSSLLERMPALDESSYIG
KRTSSSQVNISAVKLTRPTPVASPSLPNGVAHAPTNPLLDLLDLIPDDNPVPTSSTNDIV
QDLLGIGLGNPLTSGTISPSVGTDILLDLLSIGGTNDQNDVPVLDVSSKQGSEPLTNPST
FEVMDLLDGTTKDRSTDDEHPVYPSIIAFQSGTLKVAFAFTKKPDKPQITQIQVTCTNLS
TDEYMDFIFLAAVPKFIQLQLEPASGNILPANSDGAITQTLTLTNSQHGQKPLAMRMRMT
YKVNNQDKLEQGQVNNFPPEL
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgaatgcgttttcctcgccatcgcggttgagggatctgattcgagctgcacgtgcttgc
aaaactgcagcagaagagcgtgcagttgtcagaaaggaatgtgctgctatacgttcttca
atcaatgaaaatgaccaattttttaggcaccgtaatcttgctaaacttatgtttattcac
atgcttggctatcctactcatttcggtcaaatggagtgtctcaaactgattgctgctgtt
ggctttcctgagaaacggattggctatttgggccttatgctgcttctggatgaaagacag
gaagtacttatgctagttacaaattccttgaaacaagatctcaatcacttgaatcattat
attgtgggtcttgctctttgtgctttagggaacatatgttctgcagaaatggcaagggat
cttgaaccagaagtgcaaaggctctttttaagtagagacctagatataaaaaaaaaggct
gccttgtgctctatcaggataataagaaaagttccagatttggcagaaaacttaatgatt
cctgctgcttctctgttgaaagaaaaacatcatggagtcttgatatcagctgttcagctt
tgtatcactttatgtaaagtcagtgatattccccttgagcatttgaggaagagctgcata
aagggtttggttcaaattttgaaggaactgtccaacagttcatatacacctgagtatgag
attgctggggttatggaccctttcttgcaaatccgaattcttaagttgatgcgcttgttg
ggccaaggagatgttgaatgtagtgaatatatgaccgacattcttgctcaggttgcaaca
agaactgaatcacacaaaaatgctggaaatgctattttatatgaatgcgtcgaaacaata
atgggtatagaagctactagtggtttacgtgtccttgcaatcaatattctgggcaaattc
ttgtcaaatcgtgacaacaatatcagatatgttgcactcaacatgctcatgaaggcagtc
agtgtagactcacaagcagtgcagaggcacaaaacaacaatccttgaatgcatgaaggat
tctgatatctccattcgaaagaggactctggagcttgtttttcttctagtcaatgagaca
aatgtgaaacctttgacaagggaacttattggttatctagaagtgagtgatcaagatttt
aagggtgatctaactgccaaaatttgttcaattgttaagaagttctcacaggagaagaaa
tggtatattgaccagatgttcaaggttttatgtattgctgggaattatgttaaagatgat
gtattgcatagtctcataattacaataagtaatgcccttgatatacaaggttattgtgtc
agatcactatacaaggcactccaaaatcatcctgatcagggaagtttagtgcaagtagca
gtatggtgcattggtgaatatggtgagttgttggttaataacataaaggtgtctgaagtg
gagaatacaatgaatgtaacagattctcatgctgttgatgttatagaggcttctttaaaa
caccacttatcagatattaccattcagtcaatgtgtttgattgctcttttgaagctgtca
tctcgttttacatcaacctcagagaggataagagagataattattcatcacaagggaagt
gttgtgcttgaattacagcaaagagcaattgaattcaactgtataatccagaggcatcag
aatatcaaatcttctttgcttgaacggatgcctgctttggatgagtcttcttacattgga
aaaagaactagttcttcacaagtgaatatttctgcagttaaacttacccgaccaactcct
gtagcgtcacctagccttccaaatggtgttgcccatgcaccgacaaatcccttactggat
ttacttgatttaataccagatgataacccagttcctacttcatccaccaatgatattgtg
caggatttgttaggcattggcttgggaaaccctttgacctcaggtaccatctcaccgtca
gtcggtacagatattctgctagatcttctttcaattggaggaactaatgatcaaaatgat
gtgccagtattggatgtctcctccaaacaaggatctgaaccactaaccaatccatccact
tttgaagtaatggatttgttggatgggactacaaaggatagatcaactgatgatgaacat
ccagtttatccatcaattatcgctttccagagtggcaccttgaaggttgctttcgccttt
acaaagaaacctgacaaaccacaaattacacaaatccaagttacgtgtacaaacttatct
acagacgaatatatggatttcatttttctagcagctgtccctaagtttattcagctacag
ttagaacctgccagcggcaatattcttccagccaacagtgatggggcaatcactcaaact
ctaactctaactaattcccaacacggacagaaacctttggccatgcgtatgaggatgact
tacaaagtaaacaaccaagataagctagaacaaggacaagtcaacaacttccctcctgaa
ttatga
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