Zingiber officinale (ginger): 122056352
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Entry
122056352 CDS
T08725
Name
(RefSeq) E3 ubiquitin-protein ligase DIS1-like isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122056352
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
zof04121
]
122056352
Enzymes [BR:
zof01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
122056352
Ubiquitin system [BR:
zof04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
122056352
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
TerY_C
zf-C3HC4_2
zf-RING_UBOX
zf-Di19
BCA_ABC_TP_C
Motif
Other DBs
NCBI-GeneID:
122056352
NCBI-ProteinID:
XP_042474205
LinkDB
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Position
3B:34496176..34502856
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AA seq
305 aa
AA seq
DB search
MAPDATYYDEVRDNPEVIDPPKNEDMVEVSEQINDHTQLSAKANLADASSVRELLECPVC
LNAMYPPIHQCSNGHTLCSGCKPRVHNRCPTCRHELGNIRCLALEKVAASLELPCKYQSF
GCLGIYPYYCKLKHESQCMFRPYNCPYAGSECTVVGDISYLVSHLKDDHKVDMHSGSSFN
HRYVKSNPHEVENATWMLTVFSCFGQYFCLHFEAFQLGTSPVYIAFLRFMGDDSEAKSYS
YSLEVGGYGRKITWQGVPRSIRDSHRKVRDSYDGLIIQRNMALFFSGGDRKELKLRVTGR
IWKEQ
NT seq
918 nt
NT seq
+upstream
nt +downstream
nt
atggcacctgatgctacttactatgatgaggtgagagacaatcctgaggttattgatcct
cctaaaaatgaagatatggtggaagtaagcgagcaaataaatgatcatactcagctttct
gcaaaggcaaatcttgctgacgcaagcagcgtgcgtgagcttttggaatgtcctgtgtgc
ctaaatgcaatgtaccctccaatccatcagtgctcaaatggccatacgctatgttctgga
tgcaaacccagagttcataatcgatgccccacttgcaggcatgagctaggcaacataaga
tgccttgcattagagaaggttgcagcttctcttgaattgccctgcaaatatcaaagcttt
ggttgtttgggtatatatccatactactgtaagctgaaacatgaatcacaatgcatgttt
agaccctacaattgtccttatgctggatctgagtgcacagttgttggtgacatttcttat
ttggtatctcacttgaaggatgatcacaaggttgacatgcacagtggaagctccttcaac
catagatatgtaaagtcaaatccacatgaggtagagaatgctacatggatgttgacggtt
ttcagttgctttggacagtacttctgcctgcactttgaggcatttcagctgggcacatca
cctgtatacattgcattcctgagatttatgggcgatgacagtgaagccaaaagctacagc
tatagtcttgaggttggaggctacgggaggaagataacctggcaaggggttcctcgaagc
attcgcgatagccatcgaaaggtgagagacagttacgatgggctaatcatccagcgtaac
atggccctgttcttctcaggaggggatcggaaggagctgaaactgagggtaaccggaaga
atttggaaggaacagtga
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