KEGG   Zingiber officinale (ginger): 122056386
Entry
122056386         CDS       T08725                                 
Name
(RefSeq) U2 small nuclear ribonucleoprotein B''-like isoform X1
  KO
K11094  U2 small nuclear ribonucleoprotein B''
Organism
zof  Zingiber officinale (ginger)
Pathway
zof03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zof00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    122056386
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:zof03041]
    122056386
Spliceosome [BR:zof03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    122056386
 Complex B
    122056386
 Complex C
   U2 SnRNP specific factors
    122056386
SSDB
Motif
Pfam: RRM_1 RRM_5 RRM_SRRT xRRM DUF6445 RRM_PARP14_3 DUF4523
Other DBs
NCBI-GeneID: 122056386
NCBI-ProteinID: XP_042474249
LinkDB
Position
3B:37408305..37414308
AA seq 237 aa
MVVMLSGDIPPNQTVYINNLNEKVKKEELKRSLYALFSQYGRILDIVALKTPKLRGQAWV
VFAEVPAASNAVRQMQRFPFYDKPMRIQYAKSKSDCIAKEDGTFVPREKKKRQEEKAAEK
KRRAEEAQQSAANAQTNGGLSQSSQVPRHAKPGSQEPAAAPNNILFIENLPHETTKMVLE
ILFQQYPGFSEVRMIEAKPGIAFVEFSDDVQASIAMQALQGFKITPQNPMAITYAKR
NT seq 714 nt   +upstreamnt  +downstreamnt
atggtggtgatgctttcgggtgatatccccccgaatcaaacagtctacatcaacaatttg
aatgagaaggtcaagaaagaagaacttaaacgatcactctatgctttattttcacaatat
ggaagaattctggatattgtggccttgaaaacaccaaagctgagaggccaggcatgggtg
gtatttgctgaagttccagctgctagcaatgcagtacgacaaatgcaaagattcccattc
tatgataaaccaatgagaatacaatatgcaaaatcaaagtctgattgtattgcaaaagag
gatgggacatttgttccaagagaaaagaagaagaggcaagaagaaaaagctgctgaaaag
aaacgtcgagctgaggaggcacaacaatctgcagcaaatgctcaaaccaacggagggctg
tctcagtcttctcaagttccccgccatgcaaagcccggttctcaggagcctgctgctgct
ccaaacaatatccttttcatcgagaatctgccacatgaaacaacaaagatggtgctcgag
atccttttccagcagtacccaggtttctctgaagtacggatgatcgaagcaaagcctggt
attgcctttgtggagttttctgatgatgtgcaggcctccattgcgatgcaggctctccaa
ggtttcaagatcactccacaaaaccctatggcaatcacctatgcaaagagatga

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