Zingiber officinale (ginger): 122056553
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Entry
122056553 CDS
T08725
Name
(RefSeq) DNA topoisomerase 1 beta-like isoform X1
KO
K03163
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
zof
Zingiber officinale (ginger)
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zof03032
]
122056553
Enzymes [BR:
zof01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
122056553
DNA replication proteins [BR:
zof03032
]
Eukaryotic type
DNA Topoisomerases
122056553
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I_N
Topoisom_I
Topo_C_assoc
Motif
Other DBs
NCBI-GeneID:
122056553
NCBI-ProteinID:
XP_042474493
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All DBs
Position
1B:complement(52339631..52347780)
Genome browser
AA seq
931 aa
AA seq
DB search
MNDSEEDDDAPIIFRRSNSLLKQGHSTSSLKKTTAQKDSSSIFHQFVQNDSSSHKQNATS
LPKASSEKPMAGSNIGSLLPAQSTNSSHDKLTTNDRRPKHEDELSDSDDDKPLSHRHNSV
SAIVQRKCSVDSEKTHIHSSHLIVEGRSTEKMDLVDNPTIKSENSDDDKPLSVKYSGVIN
RSAFSHAAEAPQKPKPSSLKSMKLTSNTSEETDDSEDAKPLLSRFQSNVIGVSSAKVSNG
PEKPLSSKLKLNGSNKKGISSKTTAPKGGEKRPLSDANPAESSSSKKAKLTGTSVSAKVK
QEVSVSKESKEDDNDHTPIAQRMKKSPSSNSASINQNTLLKTASSSFKKSNLTMNKKRDS
KFSKSLKAPVGSGGEQKWTTLQHNGVIFPPLYKPHGIKMLYKGQPVDLTPEQEEVATMFA
VMKDTDYALKKQFIKNFMDDWRLILGKNHIIKKFEDCDFTPIYEWHLKEKEKKKQMTSEE
KKAAKEEKLKQEEKYMWAIVDGVKEKVGNFRVEPPGLFRGRGEHPKMGKLKKRIRPTDIT
INIGKDVPIPKCPIPGERWKEVKHDNTVTWLAFWNDPINPKEFKYVFLAASSSLKGQSDK
EKYEKSRLLKDYIQDIRANYTRDFNSKDPTKRQISVATYLIDKLALRAGNEKDDDEADDE
ADTVGCCTLKVENVELVPPNKLKFDFLGKDSIRYLNTVEVEPPVYTAIGDFRTAKKSNGS
KKDKVDDLFDLLDTSKLNAHLKELMPGLTAKVFRTYNASITLDVILNKETRDGSVPEKVA
VYQHANKEVAIICNHQRSVSKSHETQMSKLNEKINDLKTQREELTTDLSRAKLRKPPLED
KDGKPKKNLAPQAIENKIAQLDAKIEKMEMDKQIKEDLKTVALGTSKINYLDLRISVAWC
KRHEVPIEKIFNKSLLAKFTWAMDVDPNFRF
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgaatgatagcgaagaagatgatgatgcacctattatttttaggaggtcaaactctttg
ttaaaacaaggtcactcaacctcttctttgaagaaaacaactgctcaaaaggattccagc
tctatttttcatcaatttgtgcaaaatgatagcagctcacataagcaaaatgcaacatca
ctccctaaggcatctagtgagaagcctatggcaggatcaaatattggatctttgctacct
gcccagtcaactaattcatctcatgataaattaacaacaaatgataggaggccaaagcat
gaggatgagctatctgattcagatgatgataaaccattaagtcatagacataattctgtt
tcagcaatagttcagagaaaatgttctgtggactcagagaaaacacatatacattcttca
catcttattgttgaaggtaggagcactgaaaagatggacttggtggacaatccaaccata
aagagtgagaattctgatgatgacaaaccattgagtgtcaaatattcaggagtaatcaac
agaagtgccttttcacatgctgcagaggctcctcaaaaaccaaagccttcttcacttaaa
tccatgaagttgacttccaataccagtgaagaaacagatgattcagaagatgcaaaacca
cttctttctaggtttcagtctaatgttattggtgtttcttccgcgaaagtctccaatgga
cctgagaagcctttgtcttctaaattgaagttaaatggttctaacaagaagggcataagc
agtaagacaactgctcccaaaggtggagaaaagcgacctcttagtgatgccaatcctgca
gaatcttcatcaagtaagaaagcaaagctaacaggtacctctgtttctgccaaagttaaa
caggaggtttctgttagtaaagaaagtaaagaagatgataatgatcacacaccaattgca
caacgaatgaagaagtcaccgtcttctaatagtgcatcaatcaaccagaatacattgctg
aaaactgctagttcatcattcaagaaaagtaatcttacaatgaataaaaagagggattct
aaattctcaaagtcattgaaggcccctgttggatctggtggggagcagaaatggactacc
ttgcaacacaatggtgttatatttccccctctatacaagcctcatgggattaaaatgctt
tataagggacaaccagttgatttgactcctgaacaagaagaggtggcgacaatgtttgct
gtcatgaaagacacagattatgccctgaaaaaacaatttatcaaaaactttatggatgat
tggcgactaatacttggtaaaaatcacatcattaagaagtttgaggactgtgattttacc
ccaatatatgaatggcatctaaaggagaaggagaagaagaagcagatgacttctgaggaa
aagaaggctgcaaaggaagaaaaattgaagcaagaagagaagtatatgtgggctattgtt
gatggtgtgaaagagaaggttggaaactttagagtagaaccaccagggttatttcgtggt
cgaggagagcatccaaagatgggaaagttgaaaaagagaattaggccaacagatattacc
atcaatataggaaaagatgtaccaattcccaaatgtccaatacctggtgaaagatggaaa
gaagtaaaacatgataatactgtcacgtggttggcattctggaatgatcccataaatcca
aaagagttcaaatatgtctttctggcagcaagtagttcattgaaagggcaaagtgacaaa
gagaaatatgagaaatccaggttgttgaaggattatatacaagatattcgggcaaactat
acaagagattttaatagtaaagatccaacaaagaggcaaatatcagtggcgacctacctt
attgataagctggcactcagggctggcaatgaaaaggatgatgatgaggctgatgatgag
gctgatactgttggttgctgcactttaaaggtcgagaacgttgagttagttcctccaaat
aaattgaagtttgacttcttaggtaaagattctattagatacttaaacacagtggaggtt
gaaccacctgtttatacagcaattggtgattttcgaactgccaaaaagagcaacggaagt
aagaaagacaaggttgatgatctctttgacttgctggatacaagtaaactcaatgcacac
ctgaaggaactcatgcctggactcactgcaaaagtgtttcgtacatacaatgcttctatt
accttggatgttatattgaataaggaaaccagggatggctctgtgcctgagaaggtggca
gtctatcaacatgcaaacaaagaggttgcaattatctgtaatcaccaacgcagtgtatca
aagtctcatgaaactcagatgtctaagttgaatgaaaagataaatgatttaaagacccaa
agagaggaattgacaacagatttgagtagggctaagttacggaagcctccacttgaagat
aaagacgggaagccaaagaagaacttggcccctcaagcgatcgagaataaaattgctcag
cttgatgccaagatagaaaaaatggaaatggataaacaaataaaagaggatctgaaaaca
gttgcccttggaacatcaaaaattaattaccttgacctgagaatatcagtcgcatggtgc
aagaggcatgaagtgccaatcgagaagatattcaacaaatcactacttgcaaaatttaca
tgggcaatggatgttgatcccaacttcagattctag
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