Zingiber officinale (ginger): 41826170
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Entry
41826170 CDS
T08725
Symbol
rbcL, F6E76_pgp060
Name
(RefSeq) ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit
KO
K01601
ribulose-bisphosphate carboxylase large chain [EC:
4.1.1.39
]
Organism
zof
Zingiber officinale (ginger)
Pathway
zof00630
Glyoxylate and dicarboxylate metabolism
zof00710
Carbon fixation in photosynthetic organisms
zof01100
Metabolic pathways
zof01110
Biosynthesis of secondary metabolites
zof01200
Carbon metabolism
Module
zof_M00165
Reductive pentose phosphate cycle (Calvin cycle)
zof_M00532
Photorespiration
zof_M00611
Oxygenic photosynthesis in plants and cyanobacteria
Brite
KEGG Orthology (KO) [BR:
zof00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
41826170 (rbcL)
09102 Energy metabolism
00710 Carbon fixation in photosynthetic organisms
41826170 (rbcL)
Enzymes [BR:
zof01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.39 ribulose-bisphosphate carboxylase
41826170 (rbcL)
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GFIT
Motif
Pfam:
RuBisCO_large
RuBisCO_large_N
Motif
Other DBs
NCBI-GeneID:
41826170
NCBI-ProteinID:
YP_009694957
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Position
Pltd:58486..59949
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AA seq
487 aa
AA seq
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MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPDYEVKDTDILAAFRVTPQPGVPPEEA
GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYHIEAVIGEDNQYIAYVAYPLDLFEEGSV
TNMFTSIVGNVFGFKALRALRLEDLRIPTSYSKTFQGPPHGIQVERDKLNKYGRPLLGCT
IKPKLGLSAKNYGRAVYECLRGGLDFTKDDENVNSQPFMRWRDRFLFCAEALFKAQAETG
EIKGHYLNATAGTCEEMMKRAIFARELGAPIVMHDYLTGGFTANTSLAYYCRDNGLLLHI
HRAMHAVIDRQKNHGMHFRVLAKALRMSGGDHIHAGTVVGKLEGEREMTLGFVDLLRDDF
IEKDRSRGIFFTQDWVSMPGVIPVASGGIHVWHMPALTEIFGDDSVLQFGGGTLGHPWGN
APGAVANRVALEACVQARNEGRDLAREGNEIIREASKWSPELAAACEVWKEIKFEFEPVD
KLDKEKS
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgagttgtagggagggacttatgtcaccacaaacagagactaaagcaagtgttggattt
aaagctggtgttaaagattacaaattgacttattatactcctgactacgaagtcaaagat
actgatatcttggcagcattccgagtaactcctcaacctggagttccacccgaagaagca
ggggctgcggtagctgccgaatcttctactggtacatggacaactgtgtggactgatgga
cttaccagtcttgatcgttacaaagggcgatgctaccacatcgaggctgttattggggag
gataatcaatatattgcttatgtagcttatcctttagacctttttgaagaaggttctgtt
actaacatgtttacttccattgtgggtaatgtgtttggtttcaaagccttacgagctcta
cgtttggaggatctgcgaattcctacttcctattccaaaactttccaaggcccgcctcac
ggcattcaggttgaaagagataagttgaacaagtatggtcgtcccctattgggatgtact
attaaaccaaaattgggattatctgcaaaaaactacggtagagcagtttatgagtgtcta
cgtggtgggcttgattttaccaaagatgatgaaaacgtgaactcacaaccatttatgcgt
tggagagaccgtttcctattttgtgctgaagcactttttaaagcgcaggccgaaacaggt
gaaattaaaggacattacttgaatgctactgcaggtacatgtgaagaaatgatgaaaagg
gccatatttgccagagaattaggagctcctatcgtaatgcatgattacttaactggtgga
ttcactgcaaatactagcttggcttattattgccgcgacaatggcctacttcttcacatc
catcgcgcaatgcatgcagttattgatagacagaaaaatcatggtatgcatttccgtgta
ctagctaaagcattacgtatgtctggtggagaccatattcacgctggtacagtagtaggt
aaactggaaggggaacgtgaaatgactttaggttttgttgatttattacgtgatgatttt
attgaaaaagatcgaagtcgtggtattttcttcactcaagattgggtttctatgccaggt
gttatacccgtggcttcggggggtattcatgtttggcatatgcctgcgctgaccgaaatc
tttggggatgattccgtactacagtttggaggaggaactttaggacacccttggggaaat
gcacctggtgcagtagctaatagggtggctttagaagcgtgtgtacaagctcgtaatgag
ggacgtgatcttgctcgtgaaggtaatgaaattatccgtgaagcttccaaatggagccct
gaactagccgctgcttgtgaagtatggaaagagatcaaattcgaattcgaaccagtagat
aagctagataaagagaaaagctaa
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