Zoogloeaceae bacteirum Par-f-2: C3497_05125
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Entry
C3497_05125 CDS
T05440
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
zpa
Zoogloeaceae bacteirum Par-f-2
Pathway
zpa03410
Base excision repair
zpa03430
Mismatch repair
zpa03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
zpa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
C3497_05125 (recJ)
03430 Mismatch repair
C3497_05125 (recJ)
03440 Homologous recombination
C3497_05125 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zpa03400
]
C3497_05125 (recJ)
DNA repair and recombination proteins [BR:
zpa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
C3497_05125 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
C3497_05125 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
C3497_05125 (recJ)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
AVZ78887
UniProt:
A0A2S0QVG3
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Position
complement(1085517..1087217)
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AA seq
566 aa
AA seq
DB search
MTISPRIHTRAVPQRAFAALTQAGIHPLLARLYAARGVTAPSELDYSLAALLPPSALRGA
REAATLLADAIEAGARMVIVADYDCDGATACAVGMRALTAFGADVHYLVPDRLTMGYGLT
PAIVELAARLEPDLLITVDNGIASVEGIAAARAHGMATLITDHHLPGQLLPEADVIVNPN
QPGCEFPSKALAGVGVMFYVMLALRAELRERGAFAGRPEPNLANLLDLVALGTVADVVPL
DHNNRILISQGLQRIRAGRLQPGVRALFAAAGQDPARATSVDLGFLIGPRLNAAGRLSDM
RLGIECLITDEPGRALNLAQELDRLNRERRAIEADMQEEALACLDEIDTAQSVAISLYQP
DWHQGVIGIVAGRIKDRLHRPTIAFAPGTDGELKGSGRSIPGVHLRDALDLVSKREPGLI
LRFGGHAMAAGLAIREADFPRFCALFDEVVGALVDPAALTHRMDTDGALESGWMSLEGAR
LIEQDIWGQGFPAPLFDDIFQVDHQRLLKDRHLKLQLSKGSTRFDAIRFNHADGAPPKLR
AAFRLGVNEYNGVANVQLMLEHFEAA
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgactatatcgccccggattcacacccgtgcggtgccgcagcgcgcatttgccgcgctg
actcaagccggcatccatccgctgcttgcccgcctgtacgctgcacgcggcgtcacggcg
ccgtctgagctggattattcgctcgcagcgcttttgccgccaagtgcgctgcgcggtgcc
cgcgaagcggcgacactgctggccgacgccatcgaagccggcgcgcgcatggtcatcgtg
gccgactacgattgcgacggcgccaccgcctgcgcggtgggcatgcgcgcgctcaccgcc
ttcggtgcagacgttcattatctggtaccggaccgcctcaccatgggctacggcctcact
ccggcgatcgtggaactggccgcacgcctggagccggatctgctgatcaccgtggataac
ggcatcgccagcgtggaaggtattgccgcggcgcgcgcgcacggcatggccaccctgatc
accgatcatcatctacccggccaactgttgcccgaggccgacgtgatcgtcaatcccaac
cagccgggctgcgagtttcccagcaaagcgttggccggcgtcggcgtgatgttctacgtc
atgctcgcgctgcgcgccgagctgcgcgaacgcggtgcctttgccggacggcccgagccc
aaccttgccaatctgctcgatttggtggcgctgggcaccgtggccgacgtggtgccgctg
gatcataacaaccgcattctgatctcgcagggcctgcagcgcatacgcgccggacggctg
caaccgggggtgcgcgccctgttcgcggccgccggacaggacccggcccgggcaaccagc
gtcgatctcggctttttgatcggcccgcgcttaaatgccgccgggcggctgtcggacatg
cgcttggggatcgagtgtctgatcaccgacgagcccggccgcgcgctcaacttggcccag
gagctcgaccgcctcaaccgcgaacgtcgcgccatcgaagccgacatgcaggaagaggcg
ctcgcctgtctggatgagatcgacaccgcgcaatcggtcgcgatcagcctctaccagccg
gactggcaccaaggtgtgatcggcatcgtcgccggccgcatcaaagatcgcctgcaccgc
ccgaccatcgccttcgccccaggcaccgatggcgaactcaaaggttccggacgctcgatt
cccggcgtgcatctgcgcgatgcgctcgatctggtgagcaaacgcgaacccggcctgatc
ttgcgtttcggcggtcacgccatggccgctggcctggccatccgcgaagcggattttccg
cgcttttgtgcgcttttcgacgaagtcgtcggcgctctggtcgatccggccgcgctcacc
caccgcatggacaccgacggtgcgctcgaatccggctggatgagcctggagggcgcgcgg
ctgatcgaacaggacatctggggtcagggttttcccgcgccgctgttcgacgacattttt
caggtcgatcatcagcgcctgctcaaagaccgccacctcaaactgcaattgtccaaaggc
agcacccgtttcgatgccatccgcttcaaccacgccgacggtgccccacccaaactgcgc
gccgcctttcgtctgggcgtcaatgaatacaacggtgtggccaatgtgcaattgatgctg
gagcacttcgaggcggcttga
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