Zoogloeaceae bacteirum Par-f-2: C3497_06495
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Entry
C3497_06495 CDS
T05440
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
zpa
Zoogloeaceae bacteirum Par-f-2
Pathway
zpa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zpa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C3497_06495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zpa03019
]
C3497_06495
03009 Ribosome biogenesis [BR:
zpa03009
]
C3497_06495
Enzymes [BR:
zpa01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
C3497_06495
Messenger RNA biogenesis [BR:
zpa03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
C3497_06495
Ribosome biogenesis [BR:
zpa03009
]
Prokaryotic type
rRNA helicases
C3497_06495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UTP25_NTPase-like
Motif
Other DBs
NCBI-ProteinID:
AVZ79119
UniProt:
A0A2S0QWW3
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All DBs
Position
complement(1373594..1375402)
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AA seq
602 aa
AA seq
DB search
MSAPIESFHDLGLPEALLTALAEIGYETPSPIQAACIPPLLAGRDVLGEAQTGTGKTAAF
ALPALARVTLDLCRPQVLVLTPTRELAIQVAEAFQKYAHHLPGFHVLPLYGGQSMVVQLR
QLQRGAQVIVGTPGRVMDHLERGSLVLDDLRILVLDEADEMLRMGFIDDVEWILTHTPAE
RQTALFSATMPEAIRRVAHRHLRAPQEVKIRAATATVAAIRQCYWQVRGVDKLDALTRIL
EVEDDFDAAIVFVRTKTATVELAERLEARGYAAAALNGDMTQGLREQVIERLKNGALDIV
VATDVAARGIDVPRISHVINYDIPYDTEAYVHRIGRTGRAGRRGSAILFVAPREMRMLKA
IERATGQPIEAIALPSREKIAGRRVAQFRQQIVDTLEHEDLAFFIDVIGRIEKEACFSAR
EIAAALAYLATRERPLQVEETGTGWELATADPLEATPSERRPPGNRKEILARRRAYADGV
LTRYLIEVGRQHGATPREIVGAIANEGGIEGRYIGQIHLFDDYSTVELPKALPPELLGLL
KRIRVRQRALAIRALADGENAPDRSRARASRSQSASRQADEAGTAAQPRPRTGTAHKRPR
KS
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctccgatcgaaagcttccatgaccttggcctgcccgaagccttgctgaccgca
ctggccgagatcggctatgaaacaccctcccccatccaggccgcttgcattccgcctctc
cttgcagggcgcgacgtactgggcgaagcgcagaccggcaccggtaaaaccgcagcgttc
gcgctgcccgcgctggcgcgtgtgacactcgatttgtgccggccacaggtgctggtgcta
acgccaacccgggaactggccattcaagtcgccgaagccttccagaagtacgctcatcat
ctgcccggctttcatgtactgcctctgtacggcggacaaagcatggtggtgcagttacgc
cagttacagcgcggcgcgcaggtcatcgttggcacgccggggcgggtcatggatcacctg
gagcgcggcagcctggtgctggacgatctgcgcatcctggttctggatgaagccgacgag
atgttgcgcatgggcttcatcgacgatgtcgaatggattctgacgcacaccccggccgag
cgccaaaccgcactgttttcggccaccatgcccgaggccatccgccgggtggcgcaccgt
cacctgcgtgcgccgcaggaagtgaagattcgcgccgccaccgccaccgtggcggcaatc
cgccaatgctactggcaggtgcgcggggtagacaaactcgacgcgctgacccgcatcctg
gaagtcgaagatgatttcgacgccgcaatcgttttcgtgcgcaccaaaaccgccaccgtt
gaacttgccgagcgcctcgaggcacgcggctacgcggccgcggcactgaacggcgacatg
acccaggggctgcgcgaacaggtcatcgagcggctaaaaaacggcgcgctcgacatcgtg
gtggccaccgacgtggctgcgcgcggtattgatgtgccgcgcatcagccatgtgatcaat
tacgacattccgtatgacaccgaagcctatgtgcaccgcatcggccgcacgggccgtgcc
ggccgtcggggctccgcgattctcttcgtcgcgccgcgcgaaatgcgtatgctaaaagcc
atcgaacgcgccaccggccagccgatcgaagcgattgcgctacccagccgcgagaagatt
gccggacgccgggtggcgcagttccgccagcagatcgtcgatacgctggagcacgaagat
ctggcctttttcatcgacgtgatcggccgaatcgaaaaagaagcgtgtttttccgcacgc
gagattgccgcggcgttggcttatctggccacccgcgaacgtccgctacaagtggaagaa
accggcacgggctgggaactggccacggccgaccccttggaggctacaccaagcgaacgc
cggccaccgggcaaccggaaagagatcctcgcgcggcggcgcgcttacgcggatggtgta
ttgacccgctacctcatcgaagtcggccgccagcatggggccaccccgcgggagatcgtc
ggtgccatcgccaacgaaggcggcatcgaaggccgatacattggtcagatccaccttttc
gatgactacagcacagtcgagctgcccaaggcgctaccaccggaattgctcggcctgctc
aagcgcatccgggtgcgtcagcgtgcgctggcaattcgagcgctcgccgatggagaaaac
gctccggatcgcagccgcgctcgcgcatcgcgctcgcaaagcgcgtcgcgccaagcggac
gaagccggcaccgcggcccagcccaggccgcgcaccggcaccgcacacaaacgcccgcgc
aagagctga
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