Zymobacter palmae: ZBT109_0077
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Entry
ZBT109_0077 CDS
T05646
Name
(GenBank) superfamily I DNA and RNA helicases
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
zpl
Zymobacter palmae
Pathway
zpl03420
Nucleotide excision repair
zpl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
zpl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ZBT109_0077
03430 Mismatch repair
ZBT109_0077
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zpl03400
]
ZBT109_0077
Enzymes [BR:
zpl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ZBT109_0077
DNA repair and recombination proteins [BR:
zpl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ZBT109_0077
MMR (mismatch excision repair)
Other MMR factors
ZBT109_0077
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
BBG28877
UniProt:
A0A348HB75
LinkDB
All DBs
Position
75365..77623
Genome browser
AA seq
752 aa
AA seq
DB search
MNSHHLLDSLNDEQRQAVSAPQGNLLVLAGAGSGKTRVLVHRIAWMLEVERLSPYSILAV
TFTNKAAREMRTRLEALLSVSPRGMWVGTFHSIAHRLLRTHWHDAKLQEHFQIIDSDDQL
RLIKRLLKDHNIDDETYPPRQVMQFISGCKEEGLRPGQVEAHGDQYLLRMVELYELYQLT
CERSGLVDFGELLLRSLELLRDNPPLLEHYRERFGHILVDEFQDTNRLQYAWLKLLAGPN
GHVTAVGDDDQSIYGWRGARVENIVRFSEELPNTQVVRLERNYRSTNVILDAANALIRNN
TGRMGKELWTDISGGEKISVYAGFNDLDEARYIVDTLQKLIKEHDYKRSDIAILYRSNAQ
SRVIEETLIRSKVPYRIYGGHRFYERLEIKNALAYLRLMVSREDDASLERVINVPARGIG
TKTVELLRTHARDEGISLWQALHDLVAHKQVSGRAASALQTFANLVDRLDNETSGLMLHE
IIDHVITVTGLIEHHRAEKGEKGQARVENLEELVSAARAYVQGDMRGTDPFEPAGEAVGD
ATLENFLSEAALDAGDHEADEFEDAVQMMTLHSAKGLEFPVVFIAGIEEGLFPHNRSIED
PAGLEEERRLCYVGLTRAMQRLYLTYAEMRRLHGKETYQRASRFIRELPEDLIEEVRLRG
QVARPMPPSRSSFSSKNASRGGLYDSKRSLEQQQAEHDGMSLSLGQRVSHPVFGDGTVIG
AEGQGSRARVQINFDDEGNKWLVLGFAKLQPL
NT seq
2259 nt
NT seq
+upstream
nt +downstream
nt
atgaactcccatcatctgcttgattcgctcaacgacgaacagcgccaggccgtcagcgca
ccgcagggcaacctgctggtactggcaggggctggctccggcaagacgcgcgtgctggtg
caccgcatcgcttggatgctggaagtcgagcgcttgtcgccctacagcattttggcggta
accttcaccaacaaggccgcacgtgaaatgcgtacgcgtctggaagcgttgctgagcgtc
tcgccgcggggcatgtgggtcggtacgttccactccattgcgcaccgtctgctgcgcacg
cactggcacgatgcaaagctgcaggaacacttccagatcatcgacagtgatgatcagctg
cggctgatcaagcgcctgttgaaagaccacaacattgacgatgaaacctatccgcctcgg
caggtgatgcagttcatctctgggtgcaaagaagaaggactgcgaccggggcaggtcgag
gcgcatggcgatcagtacttgctgcggatggtcgagctgtacgaactgtatcagctgacc
tgcgaacgctcagggctggtcgactttggcgagttgctgctgcgctcgctggagctgctg
cgtgacaatcccccgttgcttgagcactaccgtgagcggttcggccatatccttgtggat
gagtttcaggataccaaccgtctgcagtacgcgtggctgaagctactcgcgggtcccaat
ggccatgtgacagccgtgggcgatgatgaccagtctatttatggctggcgcggtgcgcgc
gtcgagaacatcgtgcgctttagcgaggagctaccgaacacgcaggtcgtgcgcttggaa
cgcaactaccgctcgaccaatgtgattttggatgcggccaacgccttgatccgcaacaac
actgggcgcatgggcaaagagctgtggaccgatatcagcggtggcgaaaaaatctcggtg
tatgcggggttcaatgacctcgacgaggcacgctatatcgtcgatacactgcagaaactc
atcaaagaacacgactacaagcgtagtgatattgccatcctctatcgctccaacgcgcag
tcgcgcgttattgaggaaacgctgattcgttccaaggtgccgtaccgtatctacggtgga
caccgcttctacgagcgccttgagatcaaaaacgcgttggcctatctgcgcttgatggtc
tcacgcgaagacgacgcgtcgcttgagcgagtcatcaacgtgcccgcccgcggcataggt
accaagacagttgaattgttgcgaacacatgctcgtgacgaaggcatttcactgtggcag
gcattgcacgaccttgtcgctcacaagcaggtcagcgggcgcgccgctagcgcgttgcag
accttcgctaatcttgtcgatcgtctcgacaacgaaacttcgggactaatgctgcacgaa
atcatcgaccacgtgattaccgtgacgggattgattgagcaccatcgcgcagagaagggt
gagaaggggcaggcgcgtgtagagaacctagaagagctggtcagtgcagcacgtgcatac
gtgcagggagacatgcgcggtaccgaccccttcgaaccggccggtgaagcagttggcgac
gctacactggaaaacttcctttctgaagcggcactggatgctggggatcacgaagccgac
gaattcgaagatgcggtacagatgatgacgctgcactcagcgaaagggctcgagttcccg
gtcgtcttcattgccggtatcgaggaagggttgttcccacacaatcggtcgatagaagat
cccgctgggttggaggaagaacgacgcctctgctacgtgggtttgacacgcgccatgcag
cgtctgtacctgacctatgccgagatgcgccgtctgcacggcaaggaaacctatcagcgg
gcatcgcgcttcattcgcgaactgcccgaagacctgattgaagaagtgcgcttgcgtgga
caggttgcccgtcctatgccgccgtcccgcagcagcttttcatcgaagaatgcatcgcgt
ggtgggctgtacgattccaagcgctcgctcgagcagcagcaggctgagcacgatggcatg
agcctatcgctggggcagcgcgtttctcacccggtctttggggacggtactgtgattggt
gccgaaggccaaggcagtcgtgcgcgcgtccagatcaatttcgacgatgaaggcaacaag
tggttggtgctgggctttgccaagctgcaaccgctctaa
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