Zymobacter palmae: ZBT109_0441
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Entry
ZBT109_0441 CDS
T05646
Name
(GenBank) exonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
zpl
Zymobacter palmae
Pathway
zpl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
zpl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
ZBT109_0441
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zpl03400
]
ZBT109_0441
Enzymes [BR:
zpl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
ZBT109_0441
DNA repair and recombination proteins [BR:
zpl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
ZBT109_0441
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ZBT109_0441
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ZBT109_0441
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
BBG29229
UniProt:
A0A348HC77
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All DBs
Position
463887..465347
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AA seq
486 aa
AA seq
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MSHTFLFHDYETFGADPRRDRPSQFAAIRTDADFNEIGEPVVLFCKVSDDYLPHPAACVL
TRITPQKANRRGLPEIEFAEAVHAMMCEPNSCVLGYNSLRFDDEVTRHLFYRNLLDPYGR
EWQNGNSRWDLIDVVRAFYALRPEGIEWPMRELPDGRKAPSFKLEHLTAANGIPHEGAHD
ALSDVRATIALAKLLRAANPRLFDYLFSLRSKHKVNEMLDVVARRPVVHVSRRYPAAQGC
SALVVPLARHPSNPNGIIVCDLSVDPTPLQTLTAEQIRERVFISNDDLPEGETRIPLKVI
HANRCPVVLPIKALDVAAAERLGLDKTAAEQHWQQLVADPTLMGKVSAVFDKAHPDDESP
DPDTMLYSGSFFSASDKREMAQVHQRESGWDLVGMAPAFQDLRLPEMLFRVRARSYPDTL
ETAERQQWEAFRWERFNDAQHSALTLTNFAREIERYNQQDLTPEVRQILEEVVMHVESIM
PSQAFE
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgtctcatacctttctttttcacgactatgaaaccttcggggccgaccctcgtcgtgat
cggccgtctcagtttgcggcgattcgtaccgatgcagacttcaacgaaatcggtgagcct
gtcgtgctgttctgcaaggtatcggatgactatctgccgcatccggccgcctgcgtgctg
acgcgcatcacgcctcagaaggccaaccggcgggggctgccggagattgagttcgcggag
gccgtgcatgccatgatgtgtgagcccaactcctgtgtgctgggctacaactcgctgcgc
ttcgacgatgaagttacgcgtcatctgttctaccgcaacctgctggatccctatgggcgt
gagtggcagaacggtaactctcgctgggatctgattgacgtcgtgcgtgcgttctatgct
ctgcgtccagagggcatcgagtggccgatgcgcgagctgccagacgggcgcaaggcgccg
agtttcaagcttgagcatctgacggcagctaacggcattccacatgaaggggcgcacgat
gcgctgtccgatgtacgcgctacgattgcactggcgaagctgctgcgggcagccaatccg
cggttgttcgactacctgttctcgttgcgtagcaaacacaaggtcaacgaaatgctggac
gtggtcgcacgtcgtccggttgtccatgtgtcgcgccgttacccggctgctcaagggtgc
agtgcgctggtggtgccgttagcgcgtcatcccagtaatcccaatgggatcattgtctgt
gacctgtcagtcgatccgacgccgctgcagaccctgacggcggagcagattcgcgagcgc
gtgtttatcagcaacgatgatcttcccgagggagaaacgcgtatcccgttgaaggtcatt
catgcaaaccgttgtcctgtcgtgctgccgattaaagcgctggatgtcgctgctgccgaa
cgtttggggttggataagaccgccgccgagcagcactggcagcagttggtggcggatccc
acgctgatgggcaaggtctcagcggtgttcgacaaggctcatcctgatgatgagtcgccc
gaccccgataccatgctgtatagcggcagcttcttctcggcatctgacaagcgtgaaatg
gcgcaggtgcatcagcgtgagtcgggatgggatctggtgggtatggctcctgcctttcag
gaccttcgcctaccggagatgctgttccgagtgcgggctcgcagctacccggatacgttg
gaaacggctgagcgtcagcagtgggaggctttccgttgggagcgcttcaacgatgcgcaa
cacagtgcactaacgctgaccaattttgcacgtgaaattgaacgctacaatcagcaggac
ctgacgcctgaggtcaggcagattctggaagaagtggtgatgcacgtcgagtcgatcatg
ccgtctcaggccttcgagtga
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