Zymobacter palmae: ZBT109_0504
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Entry
ZBT109_0504 CDS
T05646
Name
(GenBank) formamido pyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
zpl
Zymobacter palmae
Pathway
zpl03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
zpl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ZBT109_0504
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zpl03400
]
ZBT109_0504
Enzymes [BR:
zpl01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
ZBT109_0504
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
ZBT109_0504
DNA repair and recombination proteins [BR:
zpl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ZBT109_0504
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
PSMbeta
NFACT_N
Motif
Other DBs
NCBI-ProteinID:
BBG29292
UniProt:
A0A348HCE0
LinkDB
All DBs
Position
532187..533002
Genome browser
AA seq
271 aa
AA seq
DB search
MPELPEVETTRRGIAEYVEGHRVDAMRVRQRRFRVPVPDGLEQRIEGECFGTLQRRAKYL
LLPIAGGHLLWHLGMSGSLRLTQADEPLRKHDHIDLDLSSGWQLRYHDPRRFGFVDFIEG
NPLEDTRLASLGPEPLSAAFTAELLAAKAKGKRVAIKSFIMDNAVVVGVGNIYANEALFM
AGIDPRKPAGQVSEASLTLLVMAIKDVLTAAIAQGGTTLRDFVSGQNTPGYFAQQLRVYG
RGGEPCIRCECRLEQVVIGQRATVFCPQCQR
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattgccggaagtcgaaacgactcgacgtggtatcgccgaatatgtagaaggc
caccgtgtcgatgcgatgcgcgtgcgtcagcggcgctttcgtgtccccgtacctgatggg
cttgagcagcgtatcgagggagagtgcttcggcacccttcagcggcgagcgaaatatctg
ctgctgcccatcgcgggcggtcatctgctgtggcatctggggatgtccggcagtctgcga
ctgacgcaggcggatgagccgttgcgtaagcacgatcatatcgaccttgatctgagctcg
gggtggcaactgcgctatcacgatccgcggcgctttggctttgtcgatttcatcgaaggc
aatccgctggaggacacacgactggcctcgctggggcctgaaccgctgtcagcggccttt
acggccgaactgctggcggctaaagccaagggcaagcgggttgcgatcaaaagcttcatc
atggataacgccgtagtggtgggggtgggcaacatctacgccaacgaggcgctgttcatg
gcggggattgatccacgcaagccggcaggccaggtcagtgaggcgtcgctgacgctactg
gtgatggcgatcaaggatgtgctgacagccgccattgcacagggtggtacgacactgcgc
gatttcgtgagcggtcagaacacgcctggatattttgcccagcagctgcgcgtctatggg
cgtggcggcgagccatgcattcgctgtgagtgtcgcctcgagcaggtcgtgatcgggcag
cgtgcgacggtattctgcccccagtgtcagcgctag
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