Zymobacter palmae: ZBT109_0927
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Entry
ZBT109_0927 CDS
T05646
Name
(GenBank) Type IIA topoisomerase
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
zpl
Zymobacter palmae
Brite
KEGG Orthology (KO) [BR:
zpl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zpl03032
]
ZBT109_0927
03400 DNA repair and recombination proteins [BR:
zpl03400
]
ZBT109_0927
Enzymes [BR:
zpl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
ZBT109_0927
DNA replication proteins [BR:
zpl03032
]
Prokaryotic type
DNA Topoisomerases
ZBT109_0927
DNA repair and recombination proteins [BR:
zpl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ZBT109_0927
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Trans_reg_C
Motif
Other DBs
NCBI-ProteinID:
BBG29700
UniProt:
A0A348HDJ8
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All DBs
Position
1002163..1004868
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AA seq
901 aa
AA seq
DB search
MGEIAKEVLPVNIEDELKQSYLDYAMSVIIGRALPDVRDGLKPVHRRVLYAMHELKNDWN
RAYLKSARVVGDVIGKYHPHGDSAVYDTIVRMAQSFSMRYVLVDGQGNFGSIDGDSAAAM
RYTEVRMARIAHELLADLEKDTVDWVDNYDGTQRIPDVLPTRIPNLLVNGAAGIAVGMAT
NIPPHNLTEVINACLALIDDDSLTVDQLMEYLPGPDFPTAGIINGRAGILDAYRTGRGRI
YMRARHTVEHDDKTGRDHIIVTELPYQVNKARLIEKIAELVKDRKIEGIAELRDESDKDG
LRVVIETKRGESGDVVVNNLFAQTQLETVFGINMVALDNGQPKTLNLRQVLDAFVRHRRE
VVTRRTLYELNRARERGHILEGLTVAISNIDEVIALIKASNSSQEAKQKLVDTVWQPGQV
LEMLDRAGATSCRPDDIEGEFGLATDRSGYRLTEAQAQAILELRLHRLTGLETEKLLEEY
QGILERIAELTEILEDPDRLMEVIRTELRTVREQYGDERRTEILASRSDLRTEDLIAEED
MVVTISRTGYAKTQPLSDYQAQRRGGRGKSATAMKDEDVIEHLRVASTHDTLLMFSDRGK
VYWLKCYELPQASRGSRGRPLVNLLPLEDDECISALLPVREYAEDSYIFFATAFGTVKRT
SLEQFSRPRSSGLIALALEEGDRLVGAAITNGNDHVMLLSSNGKAIRFEEQVVRSMGRTA
RGVRGMRLAEGARVISLIIPCTTEIDASAEVESEDYQEVTADNDVQQCYILTASENGYGK
RTRLEEFPLRGRGGQGVIAMQTSERNGEMVAAIQVADQDEMMLITDRGTLVRTRVSEVSC
TSRNTQGVTLIRVGEGERLVASVRLDEPSDDEPMIEEEEGEQTSGEADENQAADGDDTTG
A
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgggtgagatcgccaaagaggttctgccagtcaacatcgaggacgaactgaagcagtcg
tatctcgactacgcaatgagcgtcatcatcgggcgtgcacttcccgatgtacgagacggg
ctcaaaccggttcaccggcgcgtgctgtacgccatgcatgagctgaagaacgattggaat
cgtgcttatctgaagtccgcgcgtgtggttggtgatgttatcggtaaatatcacccgcac
ggcgactcggccgtttatgacactatcgtccgcatggcacagtccttctcgatgcgctac
gtgctggtcgacgggcaagggaacttcggttccatcgacggcgacagtgctgcggccatg
cgttataccgaggtgcgcatggcgcgcatcgcgcacgaactgctggccgatcttgaaaag
gataccgtcgattgggtcgacaactatgacggtacgcagcgcattcctgatgtgctgcca
acgcgcatccccaacctgctggtcaacggtgctgcaggtattgctgttgggatggcgacc
aatatcccgccgcataacctgaccgaagttatcaatgcctgtctggcactaatcgacgat
gacagtctgaccgtcgatcagttgatggaatacctaccggggcccgattttccgacggcc
ggtatcatcaatggtcgcgccggtatcctcgacgcttaccgcaccggtcgcgggcgtatc
tatatgcgcgcacgtcataccgtcgagcacgatgacaagaccggtcgcgatcatatcatc
gtgaccgagctgccttaccaggtgaacaaggcgcgccttattgagaagatcgccgagctg
gttaaggatcgcaagatcgaaggtatcgctgaactgcgcgatgagtctgacaaggacggt
ctgcgcgtcgtgatcgagaccaagcgtggtgaatccggtgatgtcgtcgtcaacaatctg
ttcgcacagacgcagttggagacggtcttcggtatcaacatggtggcgctggataatggt
cagccgaagacactcaacctgcgtcaggtactggatgccttcgtgcgccaccgccgcgaa
gtggtcacgcgccgtacgctgtacgaactcaaccgtgcacgcgaacgtgggcatattctt
gaaggtctgacggtcgcgatctccaatattgatgaggtcattgcccttatcaaggcctct
aactcttctcaggaagccaagcagaagctggtcgacaccgtatggcagccgggccaagtg
ctcgaaatgctcgaccgtgcgggcgccacttcctgccgccccgacgatattgaaggtgag
tttggtctggcgaccgatcgctctggctatcgtctgaccgaagctcaggctcaggccatc
ctcgaactgcgcctacaccgcttgactggcctcgaaactgaaaaattgctcgaagaatat
cagggcatcctcgaacgcatcgccgagctgaccgaaattctcgaagatccggaccgcctg
atggaggtgatccgtaccgaactgcgcaccgtgcgggaacagtatggtgacgagcgtcgt
accgagattctggctagccgtagcgacctgcgtaccgaagacctgatcgccgaagaagac
atggtggtcacgatctcgcgtaccgggtatgccaagactcagccactgtccgactatcag
gctcagcgtcgcggtggtcgaggcaagtccgctaccgcgatgaaggatgaggatgtcatt
gaacacctgcgtgtggcttcgacacacgacacgctgctgatgttctccgatcgtggcaag
gtgtactggctcaaatgctatgagctgccgcaggcgagccgcggttcgcgaggtcgcccg
ctggtcaatctgttgccgctggaagacgatgagtgcatctcagccctgctgcccgtgcgc
gagtacgccgaagacagttatatcttcttcgcgacggcattcggtacggtcaaacgcact
tcgcttgaacagttctcacgcccacgctccagtggtctgatcgcgctggcgctggaagag
ggcgaccgcctagtcggtgctgccatcaccaacggcaacgaccatgtcatgctgctgtcc
tccaacggcaaagcaattcgcttcgaagagcaggttgtacgctcaatgggacgtacggcg
cgcggtgtccgcggcatgcgtcttgcagaaggcgcgcgcgtcatcagtctgatcattccg
tgtacgactgaaatcgatgccagtgcagaagtggaaagtgaagattatcaagaggtaaca
gctgacaacgatgttcagcagtgttatatcctgacagcttcggaaaacggttacggcaag
cgtacgcgtctcgaagaattcccgctgcgcggacgcggtggtcagggtgtgatcgccatg
cagacctccgaacgcaacggtgagatggtagcggccattcaagtggccgatcaggatgag
atgatgctgatcaccgaccgcggtacgctggtgcgtacacgtgtcagtgaagtgtcgtgc
acgtctcgtaacacacagggtgtcactctgatccgtgttggcgaaggtgagcgtctggtg
gcgagtgtccgccttgacgagccttccgatgatgagcccatgattgaagaagaagagggc
gaacagacctccggtgaggctgatgaaaatcaggccgctgacggtgacgacacgactgga
gcctga
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