Zymobacter palmae: ZBT109_1017
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Entry
ZBT109_1017 CDS
T05646
Name
(GenBank) ATP-dependent exoDNAse (exonuclease V), alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
zpl
Zymobacter palmae
Pathway
zpl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
zpl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ZBT109_1017
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zpl03400
]
ZBT109_1017
Enzymes [BR:
zpl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ZBT109_1017
DNA repair and recombination proteins [BR:
zpl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ZBT109_1017
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
AAA_11
Viral_helicase1
SH3_13
AAA_22
Helicase_RecD
UvrD-helicase
AAA_16
SLFN-g3_helicase
UvrD_C
AAA_5
nSTAND3
NTPase_1
T2SSE
AAA_28
TrwB_AAD_bind
CbiA
NACHT
DEAD
ATPase
NPHP3_N
AAA
Motif
Other DBs
NCBI-ProteinID:
BBG29784
UniProt:
A0A348HDT2
LinkDB
All DBs
Position
1095702..1097747
Genome browser
AA seq
681 aa
AA seq
DB search
MPDQMSLFDLPTVPAAPLLGSDPLEVLTQQLANWVELGWLRTLDRHFVHFLREHGEQDVV
ALLSAAWVSHQLGRGHICLDLSQALSDPDAVLSLPPQDGRALQYTDTTVMPSRLLPSFGI
ALLAQWLERLQASLIVAVPDADAPERLSAAAPLVLDGTRLYLRRMWQAEGGVALDLAQRM
TRHDTAMPDAAQALTVLFGPPQDIGIDDQRVACALALQQRLTIISGGPGTGKTTTVTRLL
ALLQQQALATQGRPLHIRLVAPTGKAAARLSSSIAGAAASLACDAAVIDSIPSEASTLHR
LLGARPDTRHFRHDREHPLMLDVLVVDEASMVDLDLMHALLQALPDDARLILIGDRDQLS
SVEAGAVLGELCERSEGFSADVASRLVALSGQRQLMTKEVVGAPVDDPSTSPLRDHVVTL
RHSYRFKADSGISALAKAVNEGSYKALRACWQAGYDDIEFHVLNEKQPLALIKRAAHEYR
AYLALVSSGASPWDVLQAFNRFQVLCALRRGPTGVEGMNEAITQRLTKDGHIGGRKQWYI
GRPVMVTRNDPQLGLYNGDIGIALPDPQSEGRLRVFFPAAEEGTVRAIMPGRLNDIETVF
AMTVHKSQGSEFDRVLLVLPGQPNPIMTRELLYTGITRAKRFCSIATTHPVVLERTAHHR
VQRASHLRARLTRCYRMQASS
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaccagatgtctctgttcgatctgcccaccgttccggccgcgccattactgggc
agcgatccgctggaggtgctgacacagcagctggccaactgggtcgaattgggctggctg
cgcacactcgatcgccattttgtgcattttttgcgtgaacacggtgagcaggatgtcgtg
gcgttgctgtcggcggcttgggttagccaccagctgggaagaggacatatctgccttgac
ctgtcgcaggcgctgtccgaccccgacgctgtgctgtcgctgccgccgcaggatgggcgg
gcattgcagtacacggacaccacagtgatgccttcacggttactgccgtcgttcggcata
gcgttgctcgcgcagtggttggaaagactgcaggcctcgttgatcgtggccgttccggat
gccgatgcaccggagcggttgagcgctgctgcaccgctggtgcttgacggcacgcgcctg
tacctgcggcggatgtggcaagccgaaggcggtgtcgcccttgatctggctcagcgcatg
acacggcacgatacggccatgcctgacgcagcgcaggcactgaccgtgctgtttggcccg
ccacaggacatcggcattgatgaccagagagtcgcctgcgcattggctctgcaacagcgg
ctgactatcatctctggcggccccggcacgggcaagacgacgacggtgacgcgcctgctg
gcgttgttacagcaacaggcgttggctacccaaggacgtcctctgcatatccggctggta
gcaccgacgggcaaggcggccgctcgactatccagttcgattgcaggcgccgcggcatca
ctggcatgcgatgccgctgtgatcgacagtattccttccgaagcgagtacgctgcatcgc
ctgctgggcgcgcgtcccgacacgcgccatttccgtcacgaccgtgagcatccgctgatg
ctggacgtgttggtggtcgatgaggcatcgatggtcgatctcgacctgatgcatgccctg
ttacaggcattgccggacgatgcgcgcctcattctgatcggcgaccgtgaccagctatca
tcggttgaagcaggagctgtattaggtgagctgtgtgaacgcagcgaagggttcagtgca
gacgtcgccagccggctggtggcgttgagcggccagcgccagctgatgacgaaggaagtc
gtcggtgcccctgtggacgatccctcgacatcgccgctgcgtgatcacgttgttacgcta
cgtcacagctatcgctttaaagcggacagcggcatcagcgcactagcgaaggccgtcaat
gaaggtagctacaaagcactgcgtgcctgctggcaggctggatacgacgatatcgaattc
cacgtgctgaacgagaagcagcccttggcacttatcaagcgagcggcgcacgagtaccgc
gcttatctggcgctggtgagtagcggtgcatcgccttgggatgttttgcaggcattcaat
cgttttcaggtgctgtgcgcattgcgtcgtggcccaacgggcgtggagggaatgaatgag
gcgatcacgcaacggctgacgaaagacggccatatcggcggccgcaagcaatggtacatc
ggccgccctgtgatggtgacccgcaatgacccgcagctggggctgtataacggtgacatt
ggtatcgcactacccgacccgcagagcgaagggcggctgcgcgtcttctttccagcggcc
gaagagggaacggtgcgtgccatcatgccgggccgtctcaatgatatcgaaacggtcttt
gcgatgacggtacacaaatcgcaaggctctgagttcgatcgcgtactgctggtgctgccc
ggtcagccgaacccgattatgacccgcgagcttctgtataccgggatcacgcgcgccaag
cgtttctgctcgatcgccaccacccatccggtggtactggagcgtaccgctcaccaccgc
gtccagcgtgcctcacatctgcgtgcacgcttaacgcgctgttaccggatgcaagcatcg
tcatga
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