Zymobacter palmae: ZBT109_1254
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Entry
ZBT109_1254 CDS
T05646
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
zpl
Zymobacter palmae
Brite
KEGG Orthology (KO) [BR:
zpl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zpl03016
]
ZBT109_1254
Enzymes [BR:
zpl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
ZBT109_1254
Transfer RNA biogenesis [BR:
zpl03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
ZBT109_1254
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
PilZ
DUF2274
S1CSD-TOTE-2
SAM_1
Motif
Other DBs
NCBI-ProteinID:
BBG30014
UniProt:
A0A348HEG2
LinkDB
All DBs
Position
complement(1358457..1360409)
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AA seq
650 aa
AA seq
DB search
MFSNNPLLAQLKQKLHADTPRATGVVKATDKGFGFLETDDGQSYFLPPPMMKRVMHGDRI
DAVIHEENEKKSAEPEKLIEPFLERFIGRIRKREGRLSVIPDHPSISLAITSRVKRDLDE
AALQEGDWVVAHMVRHPMNPNDRSFFAQVDELIAANDQPNAPWRVTLARHALEYASPEGP
AEWTLREEGLERRDITAMPFFTIDSRSTKDMDDALSIRAHEDGGWVLSVAIADPTAYVDE
GDAIDREARQRAFTVYLPGQNVTMLPESLADNLCSLREEEDRPALGCDIHVAADGSLVSH
DFYAATVRSHAQLAYEDVSDWLEGKGEWTPSFERGEEQLRALAALTEARTAWRQQHAVVF
KDRPDYVFDLDEAGNVLDIRAEHRRIAQRMIEESMILANVCCAETLCEKIGHGIFNAHQG
FAEEKIDQALAFLAEQEIDVAREQLTDIEAYRQFRHAMDAREDAWLDARLRRFQGYTAMS
ATPAPHFGMGLERYATWTSPIRKYGDMINHRLLKAILLGTQANGAASEEATQHLAERRRL
NRMAERDVKDWLYVRYLAATIASEQVFEGELVDIRRGGLRVRLEANGASVFVPASTLVAD
KTTLAIDDKEGRVVISGECRYRLGDRVSLVLIEAREDTRSLIGRLAPASA
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgttctcaaacaatcctcttcttgctcagctcaagcaaaagcttcacgctgacactccg
cgcgccactggcgtcgtcaaagcaaccgacaagggctttggctttctcgaaaccgacgac
gggcagtcctatttcctgccaccgcccatgatgaaacgggtgatgcatggtgaccgcatc
gacgccgtcattcacgaagaaaacgaaaagaagagtgccgaaccggaaaaactgatcgaa
ccgttcctagagcgcttcatcggtcgtatccgcaagcgtgagggacgtctgtccgtcata
ccggatcatccgtccatttctctggccatcacgtcgcgcgttaagcgcgatcttgacgaa
gcggccctgcaggaaggggattgggttgttgcgcatatggtgcgtcacccgatgaacccc
aacgaccgcagcttcttcgctcaggtcgacgagctgatcgcggcaaacgatcagcctaat
gccccttggcgcgtcacgctggcccgccatgcactcgaatacgcgtctccggaaggtcct
gccgaatggacgctacgcgaagaaggccttgagcgtcgcgacatcactgccatgccgttc
ttcaccatcgacagtcgttccacgaaggatatggacgatgccctgagcatccgtgcccac
gaagacggcggctgggtactgagcgtcgcgatcgctgatccgacggcctatgtcgatgaa
ggcgatgcgattgatcgtgaagcacgtcagcgtgccttcaccgtctatctgccgggccag
aacgtcaccatgctgccggaaagtctggccgacaatctgtgctcgctgcgcgaagaagaa
gaccgtccggcgctgggctgtgacatccacgttgccgccgatggcagcttggtcagtcat
gacttttacgccgcaacggtacgctctcacgcccagctggcctacgaagacgtctctgac
tggctggaaggcaaaggcgagtggactccgtcattcgaacgcggtgaagaacagctgcgt
gcccttgccgcgctgaccgaagcccgtacggcatggcgtcaacagcacgccgtcgtcttc
aaggaccgtcccgactatgtcttcgatctggatgaagcaggtaacgtcctcgacatccgc
gccgagcaccgccgtatcgcccagcgcatgatcgaagaatcgatgattctggccaacgtc
tgctgcgcggaaaccctgtgtgaaaagatcggccacggtatcttcaacgctcatcagggc
tttgccgaagagaagattgatcaagcactagcgttcctcgccgaacaggaaatcgacgtt
gcacgcgaacagctcaccgatatcgaagcctatcgccagttccgccatgcgatggacgct
cgcgaggatgcttggctggacgcccgcctgcgccgcttccagggctatactgccatgagc
gctacaccggcaccgcacttcggtatgggccttgaacgctacgcgacgtggacctctccg
atccgtaagtacggcgatatgatcaaccatcgcctgctcaaggccattctgctcggcact
caagctaatggcgccgcgtctgaagaagcaacgcagcatctggccgaacgtcgtcgcctc
aaccgcatggccgagcgcgacgttaaggactggctgtacgttcgctatctggccgccacc
attgccagcgaacaagtcttcgaaggcgagctggtcgacatccgtcgcggaggcctgcgt
gttcgtctcgaagccaacggtgcttccgtgtttgttccagcgtccacgctggtagcggat
aaaacgacgctggctatcgatgataaggaaggtcgtgtcgtcatcagcggtgaatgccgc
taccgccttggcgatcgcgtcagcttggtgctgattgaagcgcgtgaagacacccgttca
ctgatcggtcgtctggcccccgcaagcgcataa
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