Zymobacter palmae: ZBT109_1933
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Entry
ZBT109_1933 CDS
T05646
Name
(GenBank) topoisomerase IA
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
zpl
Zymobacter palmae
Brite
KEGG Orthology (KO) [BR:
zpl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zpl03032
]
ZBT109_1933
03400 DNA repair and recombination proteins [BR:
zpl03400
]
ZBT109_1933
Enzymes [BR:
zpl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ZBT109_1933
DNA replication proteins [BR:
zpl03032
]
Prokaryotic type
DNA Topoisomerases
ZBT109_1933
DNA repair and recombination proteins [BR:
zpl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ZBT109_1933
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_recom
DUF7838
Toprim_4
HVO_2901
Motif
Other DBs
NCBI-ProteinID:
BBG30679
UniProt:
A0A348HGC7
LinkDB
All DBs
Position
complement(2117498..2120146)
Genome browser
AA seq
882 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGDEFIVKSSVGHIRDLPTGGNDRRTTTPAERSQQAALTR
KMSPEQKAEYKLRKQHEQLIRRMGVDPDHDWEAHYEILPGKEKVVDELKRLARKADAIYL
ATDLDREGEAIAWHLRETIGGDEGRFRRVVFNEITKNAIQQAFQSPGELQMPRVRAQQAR
RFLDRVVGFMLSPLLWGKVARGLSAGRVQSVAVRLIVEREREIRAFVPEEFWDVMARLRY
GKDDVLNFELVRQNGEPFRPVSEEETLSRIAGLYDATLAITKREDRPTSSKPGAPFITST
LQQAASGRLGFSVKKTMMLAQRLYEAGYITYMRTDSTNLSQDAVEQVRDHIAAEYGDAYL
PDAPVRYSSKQGAQEAHEAIRPTDVKRATSQLSGMERDAERLYELIWRQFVACQMVPARY
LSTALTVDADGYTLRTRGRVLKFDGYTRVLPPSSRSAEDQQLPDIQEGTALTLDGLDPEQ
HFTKPTARYTEASLVKELEKRSIGRPSTYASIISTIQDRGYVRLENRRFYAEKLGEIVTD
RLVESFQDLLDYSFTARMEGSLDGVAEGQRDWLQLLNTFYGDFKAELDKASGDDGMRPNQ
PVDTDIKCPDCGRHMQIRTASTGVFLGCSGYNLPPKERCKKTIDLLPGEEAVAADAGDEA
ETDALRAMHRCPICGTAMDSYLVDEHRKLHVCGNSPDCAGYEIEHGSFRIKGYEGPTLEC
DKCGSEMQLRAGRFGKYFACTNDDCKNTRKLLKSGEAAPPKMDPIPMPELACQKVEDHYV
LRDGASGLFLAASQFPRKRETRAPLVLELQPHRETLPEKYHFLLDAPVADPDGRPAQIRF
SRKSKEQYVMTEDNGKATGWRASFVDGRWVVEDKRKPAKSAK
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagtcactggtgatcgtggaatcgccggccaaggccaagaccatcaataagtat
ctgggcgacgagttcatcgtgaagtccagtgtaggtcatatccgtgacctgccgacgggt
ggcaatgatcggcgtacgacgacgccggcagagcgcagccagcaggctgcgctgacgcgc
aaaatgtcgcctgaacagaaggccgaatacaagctgcgcaaacagcacgagcagttgatt
cgtcgcatgggcgtcgatcctgatcatgattgggaagcgcactacgaaattctgccgggc
aaggaaaaagtcgtcgacgaactgaaacgtctggcccgcaaggccgacgctatctatctc
gcaaccgaccttgaccgcgagggggaagccattgcttggcaccttcgcgagaccatcggt
ggtgatgaaggccgtttccggcgtgtggtgttcaacgagatcactaagaacgcgatccag
caggccttccagtcgccgggcgagttgcagatgccacgcgtccgcgcccagcaggcacgg
cgtttcctcgaccgcgtggtgggcttcatgttgtcgccgctgctgtggggtaaggtggcc
cgcggattgtcagccggccgcgtgcagtcggtggcggtgcgtctgatcgttgagcgagaa
cgtgagatccgtgccttcgttcctgaggaattctgggacgtcatggcgcgtctgcgctat
ggcaaggacgacgtactgaacttcgagctcgtgcgccaaaacggtgagccgttccgtcct
gttagcgaagaagagacactgtcgcgcatcgcggggctgtacgatgcgactctggcgatc
accaagcgtgaagaccgcccgacgtccagcaagcccggcgctccctttattacgtcgacg
ttgcagcaggcggcaagtggtcgcttaggcttttcggtcaagaagaccatgatgctggct
cagcgcttgtatgaagcgggctatatcacgtatatgcgtaccgactccaccaacctgtca
caggatgccgtggagcaggtgcgtgatcatatcgctgctgaatatggcgatgcgtacctt
cccgacgctcccgtgcgctattccagcaagcagggcgcacaggaagcgcacgaggcgatc
cgcccgaccgacgtgaagcgtgcgacctcgcagctgagcggcatggaacgtgacgcggaa
cgcctctacgagttgatctggcgccagttcgtggcctgccagatggtgcctgcgcgctat
ctgtcgacggcgctgaccgtagatgccgatggctacacactgcgtacgcgcggccgcgta
ctgaagttcgacggttatacgcgcgtgctgccgccgagcagccgcagtgcggaagatcaa
cagttaccggacatccaagaaggcacggcgctgacgctggatggtctcgaccctgagcag
cacttcaccaagccgacggcgcgctacaccgaggccagcttggtcaaggagctggaaaaa
cgcagcatcggtcgcccatccacttatgcgtcgatcatctcgaccattcaggatcgcggc
tacgtgcggctggagaaccgtcgtttctacgccgagaagctgggcgaaatcgtgaccgac
cgcttggtcgagtctttccaggatctgcttgattacagctttaccgcgcgtatggaaggc
agcctagacggtgtcgccgaaggccagcgcgactggctgcagttgctcaatacgttctat
ggcgattttaaggccgagctcgacaaggccagcggcgatgacggtatgcgccccaatcag
ccggtcgataccgatatcaaatgcccggactgcggtcgtcatatgcagatccgtacggca
tcgacaggggtcttccttggctgctccggttataacctgccgcccaaggaacgttgcaaa
aagaccattgacctgctgccaggtgaagaagccgtagcggcggatgccggtgatgaagcc
gaaacggatgcactgcgcgccatgcaccgttgccctatttgtggcacggcgatggacagc
tatctggtcgacgaacaccgcaaactgcacgtctgcggtaacagtcctgattgtgccggg
tatgaaatcgaacacggcagcttccgcatcaaaggttatgaaggtccgacgcttgaatgc
gataagtgcggatcggaaatgcagctgcgtgctgggcgtttcggcaagtattttgcctgc
accaacgatgactgcaagaacacgcgcaagctgctgaagagcggtgaagcggcaccgccg
aagatggatccgattccgatgccggaactggcctgtcagaaggtggaggatcactatgtc
ctgcgtgatggggccagtggcctgttcctcgccgcgagccagtttcctcgcaagcgtgaa
acgcgggcaccgttggtgctggaactgcagccgcatcgcgaaacgctgcctgaaaaatac
cacttcctgctggatgcgcctgtggccgatccggacggtcgtcccgcacagatccgcttc
tcgcgtaagagcaaggagcagtacgtgatgactgaagacaacggtaaggctaccggctgg
cgcgcctctttcgtcgacgggcggtgggttgtagaagataagcgtaagccggctaagagt
gcgaagtga
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