Zymobacter palmae: ZBT109_2319
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Entry
ZBT109_2319 CDS
T05646
Name
(GenBank) YD repeat protein
Organism
zpl
Zymobacter palmae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHS_repeat
RHS
DUF6531
Ribonuclease
TEN_YD-shell
DUF4595
Motif
Other DBs
NCBI-ProteinID:
BBG31051
UniProt:
A0A348HHE9
LinkDB
All DBs
Position
complement(2579166..2584010)
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AA seq
1614 aa
AA seq
DB search
MTDTPQNDQQSLVSPQQVVNDASAAEENPLKGIDPKLIEQANQRRVMYAPANVEPSQPEV
TMEEPKPNENGSNMVHYIMEGAACIPIVGNVIALKDVAFDTYEICKTDEHNQHSNLKNIW
LWVTLGVDGIGIIPAAGNASAPIRAVVRHGLWEFARGAGLALLIDKLVEVFSGQIEEFLL
KLQSWIEELKSLLVDLIQKLGNSLADFIHSPFNWAKQVKLIEEGWTVWPSDNVKKIAFKG
MEKLLDCLDQTLRQSLEQGMRDYSVQGAVMVGDAILKLMPLVIAITDAVLARRHRTKNVQ
AQSHVTNDGKAHQPAALVEQKGDCTKAPADNHPTPAKDKPGCSTCPKVEAKHRPPPRTQN
PIHLVMGDENLWQNDFVVPGLIDLEWTRFYRSSCDMLDDSELGARWSTPYHLRFEQSDEQ
LFFIDDENRCVPLASLAVGESRYEPAEHITLSRPSEHEIVLETLYNDRQRYVRMGSANTA
GRHVFRLVEVREQDGNALHFEYDTAQRLMTRITDGAAMDVRLTYNAEGLVERIERHFPDA
EHAPEVLSHYVYDTQRDLVAQTDARDRTRTYRYEQHLLTFYANRNGLGCHLEWEWPGQAG
GEPANAREARCIHNWLDDGSEDTRFEYNRSMWYTKVTDAQGLETFYRYNYFNRIESRTTP
YQPHLGSEHWRWDEYGNLLAHIDGEGRTFAFEYDAKGRLIRFSDPMSRTMAFEYDEKGHQ
VKTIDPMGRTREMQYDSQNRVAADTDFAGRTTQFSYNDQSLPIKVIDPANNEYGYQWNEQ
GQLVASTDCSGQKTTYTYDHRGQLIEQTDALKQKIYFQRDRMGLPTVVRYPDGTTEQFEY
DGEGNLTRYVNPTGEETRYAYDGKGLPVERIDAAGFRLAYQYDTLRRLSRLTNQNGEQWT
FDYDGVGRLKQEVGFDGRTRKYQYDEGGMLLTYSEGDQATLYERDSTGLLKRKLIERKGH
GIVETRYAHDMLGRLTSVQNSHSAVRLHYDALDNLIAEEQTADLPDGYHYRSVYRHTYDV
LGNRQTTTLPNGQEVAWLRYGSGHVHAMSLDRQPLFDFERDALHRETARHYGVQQQTRQY
DVMGRLTRQQRLLGDDAKQQRLYHYTQTSELYGIDDSLKGETRYQYDPIGRLKAANTPLG
NETFAFDPAGNLIDPELLQNTEQHRDSQPINTRWDGAREEVKFDYRQLPKVMGNLLERYA
GTHYQYDERGNRRRQTEPSGHTTEYFYDADDRLIEVKRYRRAPAAGDTTPPEMHAKYGYD
GFGRRLWKLVKDGKATPKLTVFSWDTNLLTSEEVFEGEFHFWDTFAYPQEPELEPEDPSK
KFSLPVAQRVHTLTARALKRTHWLYEPDSFVPAAQLAETYDQHAQRMTGTGQAAYSSAVS
TGAATVEPQLYYIHTDHLGTPQELTDREGNLQWVGQYRAWGELAKATDSEGNAANVEMSL
RFQGQYFDSETGLHYNRFRYYDPQVGRFTTQDPISLAGGINLYQYAPNPVQWVDALGLQR
LNQKCPSGTGDNIPKLDRSQLPLEERNALDRTVNHIDNGATPNDATAKRWGINFENRRGD
LPGGKYENSPYREYRVSPSPDTPQGKPGPRRVVVNNDSGQKYYTQDHYKTFIEI
NT seq
4845 nt
NT seq
+upstream
nt +downstream
nt
atgacagacacaccacaaaacgatcagcagagcctggtctcacctcaacaggtagtgaac
gatgccagcgcggcagaagaaaatccgctcaaaggcattgatcccaagctgattgagcag
gccaaccagcgacgtgtgatgtatgccccggccaacgttgagccttctcagccagaagtc
acgatggaagagccgaagccgaacgagaacggcagcaacatggtgcactacatcatggaa
ggggccgcatgcattcctatcgtaggtaatgtcattgcacttaaagatgtggcgttcgac
acctatgaaatctgcaaaaccgacgagcataaccagcattcgaatctcaagaacatctgg
ctatgggtcacgctcggcgttgatggtatcggcataatacctgcggcaggtaacgcctct
gcccccatccgtgctgttgtcagacacggcctgtgggagttcgcgcgcggtgcggggttg
gcgctattaatcgacaagctggtcgaggtattcagcggccagattgaagagttcttattg
aaattgcagtcatggattgaagagctcaaaagccttctggttgatctgatccagaagcta
ggtaactcgctggcggatttcatccacagcccgttcaactgggccaagcaggtcaagttg
atcgaggaaggctggaccgtttggccatcggacaatgtcaaaaaaattgcctttaaaggc
atggaaaagctgctggattgtttggatcagacactgcgccagtcccttgagcagggcatg
cgtgactatagcgtgcagggcgccgttatggtgggggatgccatactcaagctgatgccg
ctggtgattgccattaccgatgccgtactggcacgtcgtcaccggacaaagaacgtgcag
gcgcagtcacacgtgaccaacgatggcaaggcgcatcagcccgccgcgctggttgaacag
aaaggtgactgcaccaaggcacctgccgacaatcaccctacgccggcgaaagataagccc
ggctgctcaacgtgccctaaagtagaggcgaaacaccgtcctccgccccgtacacagaac
ccgattcatcttgtaatgggggatgaaaacctatggcagaacgactttgttgtgcccggg
cttattgaccttgagtggacgcgcttctaccgttccagctgtgacatgctggacgatagc
gagctgggtgcgcgttggagtacgccctaccatctacgcttcgagcagagcgacgagcag
ctgttctttattgacgatgaaaaccgctgtgtgccgcttgcctccctcgctgtgggcgag
tcgcgttatgaacccgcggagcatatcacgctgtcacgtccttccgagcacgagatcgtg
ttggagacgctttataacgatcgccagcgctatgtgcgaatgggcagtgccaataccgcg
ggacgccatgtgttccggctggtcgaggtccgcgaacaagacggcaacgcgctgcacttc
gagtatgacaccgctcagcggctgatgacgcgtattactgacggtgcggcgatggacgtg
cgcctgacgtataacgcggagggactggtcgaacgtattgagcgccattttccggatgct
gagcacgctcctgaagtgctatcgcactatgtgtatgacacgcagcgcgatctggtcgcg
cagaccgatgcccgcgaccgtactcgcacctaccgctatgaacagcacctgctgacgttc
tatgccaaccgcaacggtctggggtgccacctagagtgggagtggcccggtcaggcagga
ggtgaacccgccaatgcgcgtgaagcgcgctgtatccataactggctggacgatggcagt
gaagatacccgcttcgagtataaccgcagcatgtggtacaccaaggtcaccgatgcgcag
gggctagagaccttctatcgctataactacttcaatcgcattgagtcacgcaccactccg
tatcagccgcatcttggcagcgaacactggcgctgggacgagtacggtaacctgctggcc
catattgatggtgaagggcgtacctttgcctttgaatacgatgccaaggggcgtttgatc
cgctttagcgatccaatgtcacgtacgatggcctttgaatacgatgaaaaagggcatcag
gtcaaaacgattgaccccatgggccgtacgcgcgaaatgcaatacgacagtcaaaatcgt
gttgcagcggacacagactttgcgggtcgcaccacccagttcagctacaacgaccagtcg
ctgccgatcaaggtcatcgatccggccaataacgaatacggttatcagtggaatgaacaa
gggcagctggttgcttctaccgactgttcaggccagaagactacctatacctacgatcat
cgtggtcagctgatcgagcaaaccgatgcgctgaaacagaagatctatttccagcgcgac
cggatggggctgccgaccgtcgtgcgttatcccgatggcaccactgagcagttcgagtac
gacggcgagggcaacctgacccgctacgttaacccgacaggcgaagaaacccgctacgcc
tacgacggtaaggggctgccagtcgagcgcatcgatgcggccggtttccggttggcctat
cagtacgacactctgcgccgcctgtcacgcctgaccaaccagaacggtgagcagtggacg
ttcgattacgacggtgtcggtcgtcttaagcaggaagtgggcttcgacggtcgtacccgc
aagtaccagtacgacgaaggcgggatgctactgacgtacagcgagggcgatcaagccacg
ctgtacgaacgtgacagtacggggctgctgaagcgcaagcttatcgaacgcaagggtcac
ggcatcgttgagacgcggtacgcgcatgacatgttgggtcgcctgacctccgtgcagaac
agccacagcgcggtacgtctgcattatgacgcgctggataatttgatcgctgaagaacag
accgctgacctgccggacggttatcactaccgcagcgtctatcgtcacacctacgacgtg
ctgggtaatcgccaaacgaccacgctgccaaacgggcaggaagtggcatggctgcgctat
ggctctggccacgtgcatgcgatgtcgcttgatcgccaaccgctattcgatttcgagcgc
gatgcgctgcatcgcgaaacggcgcgccactatggcgtccaacagcagacgcgccagtac
gatgtgatgggccgcctgacccgtcagcagcgtctgctaggtgacgatgctaaacagcag
cgcctgtaccactacacccagacctctgaactgtacggcattgacgactcgctcaagggt
gaaacgcgctatcagtatgacccaattggtcgtttgaaagccgccaacacaccgctgggc
aatgagacctttgcgtttgacccggcgggtaacctgatcgaccccgaactgctgcagaat
accgagcagcaccgcgacagccagccgatcaacacccgctgggacggcgcgcgcgaagaa
gtcaaattcgactaccgccagctgcccaaagtgatgggcaacctgctggaacgctatgcg
ggtactcattaccagtacgatgagcgcggcaaccgccgccgtcagacggaaccaagcggc
cataccaccgaatatttttatgatgccgatgaccgcctgattgaggtcaaacgctaccgt
cgcgcccctgcggccggtgataccacaccacccgagatgcacgccaaatacggctacgac
ggctttgggcgtcgcctatggaaactggtcaaagacggcaaggccacacctaagctcacc
gtgttcagctgggacaccaacctactgacctcggaagaggtgttcgaaggcgagttccac
ttctgggacacctttgcctacccgcaagagccggaactcgagcccgaagacccgagcaag
aaattctcgctgccagtcgcccagcgcgtgcacacactgacagcacgtgcacttaagcgc
acccactggctgtacgaacccgatagcttcgtacccgcggcacagctggctgagacctat
gaccagcatgcccaacgcatgacaggcactggccaagccgcctactcatccgctgtatcg
acaggcgcagcaacagttgaaccccaactgtactacattcataccgaccatctgggcaca
ccgcaggaactcaccgaccgcgaaggcaatctgcagtgggtagggcagtaccgtgcgtgg
ggtgagctggcaaaggccactgatagcgaaggcaatgccgctaacgttgagatgtcactg
cgcttccaagggcagtacttcgactctgaaacggggctacactacaaccgctttaggtac
tacgacccgcaggtagggcggtttacgacccaagacccgattagcctcgcgggtgggatt
aatctttatcaatatgcacctaacccagtgcagtgggtagatgccttgggtttgcaacgt
ctgaatcaaaaatgtccaagcggaactggcgataatattccgaaactggacagatcccaa
ttgcctcttgaagagagaaatgctctcgatcgcactgtcaaccatatagataatggagcg
acccccaacgatgctactgccaaaagatggggtattaatttcgagaaccgacggggcgat
ttgcccggaggaaaatatgaaaactctccttatagagagtatcgtgtgtctccctcgccg
gatacaccacaaggaaagcctggacctcgacgggttgtagtgaataacgattcagggcag
aaatattatacccaagatcattacaaaacatttatagaaatatga
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integrated database retrieval system
