Zunongwangia profunda: ZPR_1211
Help
Entry
ZPR_1211 CDS
T01216
Name
(GenBank) PcrA-like UvrD/Rep family ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
zpr
Zunongwangia profunda
Pathway
zpr03420
Nucleotide excision repair
zpr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
zpr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ZPR_1211
03430 Mismatch repair
ZPR_1211
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zpr03400
]
ZPR_1211
Enzymes [BR:
zpr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ZPR_1211
DNA repair and recombination proteins [BR:
zpr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ZPR_1211
MMR (mismatch excision repair)
Other MMR factors
ZPR_1211
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_30
ResIII
DUF1179
Motif
Other DBs
NCBI-ProteinID:
ADF51550
UniProt:
D5BIU8
LinkDB
All DBs
Position
1322743..1325064
Genome browser
AA seq
773 aa
AA seq
DB search
MEAYLAELNDAQRAPTLQIDGPMIVIAGAGSGKTRVLTYRIAYMMSKGIDAFNILALTFT
NKAAREMQHRISQIVGRSEAKNLWMGTFHSVFAKILRFEADKLGYPSNFTIYDTQDSQSV
IRAIIKDMQLDKDVYKYKQVYSRISSYKNSLITVKAYFNNPELMEADAMSKKPRMGDIYQ
EYVQRCFKAGAMDFDDLLLKTNELLNRFPEVLQKYQNRFRYILVDEYQDTNHSQYLIVKA
LSDKFQNICVVGDDAQSIYAFRGANINNILNFQKDYDGVEMYRLEQNYRSTGNIVNAANS
IIDKNQTKLDKVVWTANDDGPKIVVNRLLTDGEEGRFVASSIFENKMQQQMANGDFAILY
RTNAQSRAMEDALRKKDIPYRIYGGLSFYQRKEIKDVLSYLRLLINPKDEEALKRVINYP
ARGIGATTMDRLSIAANKYGKSIFEVLENLDHLPELKITKSTRTKLDNFVNMIKHFTILA
QNADAFTVADTVTKKTGLVQELKKDGTPEGIARIENIEELLNGIKDFVEEQKELADANGS
IAEFLEDVALATDMDKDTEDEDRVALMTIHLAKGLEFPYVYIVGMEEDLFPSAMSMNTRS
ELEEERRLFYVAVTRAEKQAFLTYTQSRYRWGKLVDAEPSRFIEEIDDKYLDYMIPQDDY
KYKPLINTDIFGDEVDKSKLRQTKPKAGTPPAHKPTEEQLRKLRKLRPAASEPEKASNAI
QLDVGNEVEHMRFGKGKVLGIEGVGQDKKAEIDFENGGIKKLLLRFAKLNILK
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
ttggaagcttatttagccgaattaaacgacgcccaaagggcgccaacattgcagattgat
ggtcctatgatcgtaattgccggagcaggttctggtaaaacccgggtacttacctatagg
atcgcatacatgatgagtaaagggatcgatgcctttaatattctagctttaacctttact
aataaagcggcgcgtgagatgcagcaccgtatttcacagattgtgggtagaagtgaagcc
aagaatctgtggatgggaacatttcattcagtttttgccaagattttgcgctttgaggca
gataaattaggttacccttctaattttacaatctatgatactcaggattcgcaaagtgtg
attagggcgatcatcaaagatatgcagcttgataaagatgtttataagtataaacaggtt
tatagccgtatttcgtcttataaaaacagtttgattaccgtaaaagcctattttaacaat
ccagaattgatggaggccgatgcaatgagcaaaaagccgagaatgggcgatatttatcag
gaatatgtgcagcgttgttttaaagccggggcgatggattttgatgatttattgctaaaa
accaatgagcttttaaaccgttttcctgaagtgcttcaaaaataccagaatcgttttcgc
tatattctggtagatgagtatcaggataccaatcactcacagtatttaattgtaaaagcc
ctgtctgacaaatttcagaatatttgtgtggttggggacgatgcacaaagtatctatgct
ttccgcggtgcgaatattaataatatcctgaatttccagaaagattacgatggagttgaa
atgtaccgtttagaacaaaattaccgctctaccggaaatattgttaatgctgcaaactca
ataatcgataaaaaccaaaccaaacttgacaaagtggtttggacagcaaatgatgatggt
ccaaaaatagtggtaaaccgattattaaccgatggtgaagaaggccgatttgtagcgagt
tcgatttttgagaataagatgcaacagcaaatggctaatggcgattttgcaattttgtat
cgaaccaatgcacaaagtagggcaatggaagatgctctgcgaaagaaagatattccctat
cgaatttatggaggtttatctttttaccagcgtaaagaaataaaggacgttctgtcctat
ttacgtttattgattaatccaaaagatgaggaagccttgaagcgggtgattaattatcct
gcccggggtattggagccacaaccatggatagattgagtatcgctgccaataaatatggg
aaatcgatctttgaggttttggaaaatctggatcaccttcccgaacttaagatcactaaa
agcacacgtaccaagctggataattttgtaaatatgatcaaacattttacaattttggcg
cagaatgccgatgcttttacggttgctgatacggttaccaaaaaaaccggactggtccag
gaattaaaaaaggatggcacacccgaaggaattgccagaattgaaaatattgaagaatta
ttaaacgggattaaagattttgttgaagaacaaaaagagttggctgatgctaatggatcg
atagctgaatttttagaagatgtggcgctggcaacagatatggataaggataccgaagat
gaagatcgtgtagcgctaatgaccattcacctggcgaaaggattagagttcccttatgtg
tatattgttggaatggaagaagatctgtttccttcggcaatgagtatgaatactcgatct
gagttggaagaagaacgccgtttattctatgttgcagtgaccagagcagagaaacaggcg
tttttaacctatacgcaaagccgatatcgttgggggaaattagtagatgccgaaccaagc
cggtttattgaggaaatcgatgataagtatttggattatatgattccgcaggatgattat
aaatataagccgcttatcaatacagatatttttggcgacgaagttgataaatctaaatta
cgccaaaccaaaccaaaagcaggaacgccacctgcgcataagccaactgaagaacagcta
agaaaactaagaaagttaagaccggcagcttcagagcccgagaaagcctcaaatgctatt
caacttgacgttgggaacgaggtagaacatatgcgttttggtaaaggaaaagttttgggg
atagaaggtgttggccaggataaaaaagccgaaatcgattttgaaaatggaggcatcaaa
aaactattgctaagattcgctaaattgaatatactgaagtaa
DBGET
integrated database retrieval system
