Zunongwangia profunda: ZPR_1766
Help
Entry
ZPR_1766 CDS
T01216
Name
(GenBank) uvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
zpr
Zunongwangia profunda
Pathway
zpr03420
Nucleotide excision repair
zpr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
zpr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ZPR_1766
03430 Mismatch repair
ZPR_1766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zpr03400
]
ZPR_1766
Enzymes [BR:
zpr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ZPR_1766
DNA repair and recombination proteins [BR:
zpr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ZPR_1766
MMR (mismatch excision repair)
Other MMR factors
ZPR_1766
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
UvrD_C
UvrD_C_2
Pribosyl_synth
DUF7627
Motif
Other DBs
NCBI-ProteinID:
ADF52100
UniProt:
D5BLY4
LinkDB
All DBs
Position
complement(1905239..1906804)
Genome browser
AA seq
521 aa
AA seq
DB search
MVNVGKPKLVIAGPGAGKTHGMVDEIIQALKLLERHRYMIVVTYTNSATKNIKKRLGKKI
AIPPNLFIGTIHSFLNKFIVIPYSSLHNDDVNGEKLFIQCGTDDVLKRMFDNSGETPDYK
AKNYIKSRLTTSLHKNGYITYDQTLSLAEKAITNKRIKEMLSNRIQFLYVDEFQDTGNKM
FSIIESLRKEKKTIIYCVGDPEQYIQSFDSSIKNFQNIPILKASRMNQYETELNKTNRRS
VKTIVTFLNNFSKRVYQDNTFEQHCHNEIPGTPVKFINATQNITSMLPEFFARCEKENIP
HKERGIIAKKNDVVKKAIAALNGNVLAPDKSAKISAVSEIKDTLLSSLGTNQSAFCEAHG
LTPFDLRIMAVQIIRAIRSEMITNENSFAIFVKDTFGYIIKNDIPFKLENLRQIIVSNTN
AEAIMVSNIHRFKGLELDAILAVAKNEAELNLWLETSTDFRDAHSDRGTSDYPRLGYVAF
SRARKVLCIACLESISDNTKQKLNNLGVEIDTPTLQFPSLI
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggtaaatgtgggtaaaccaaaacttgtaattgctggacctggtgctggaaaaacccac
ggtatggttgatgaaattatccaagctctaaaattattggaacgacatcgctatatgata
gttgttacctataccaattcggctacaaaaaatataaagaaacggctcggtaagaaaata
gccataccacctaatttatttatcgggaccatacattctttcttgaataaatttattgtt
ataccgtattcaagtttacataatgatgatgtcaatggtgaaaaattatttattcaatgt
ggaacggatgatgttctaaaaagaatgtttgataatagtggcgagacacctgactacaaa
gccaaaaattatataaaaagtagattgacaacttctcttcataaaaacggctacattact
tacgaccaaacgctcagcttagctgaaaaagctataacgaacaaaagaataaaagagatg
ttgtctaacagaattcagtttttatatgtcgatgaatttcaagatactggaaataagatg
ttttctattatagagtctcttagaaaggaaaaaaagacaataatatattgcgtaggcgac
ccagaacaatacattcaaagctttgattcttccattaaaaacttccaaaatatcccgatt
ctcaaagcttcacgaatgaatcaatatgagaccgagctaaataaaacgaatagacgctct
gtaaagacgattgtaacttttttaaacaactttagcaaacgagtttaccaggacaataca
tttgagcaacattgccataacgagatacctggcacacctgtaaagtttataaatgcaacc
caaaatattacatcgatgctacctgaattttttgcccgatgtgaaaaagaaaatattccg
cataaagaacgcggcataattgccaaaaaaaatgacgtagttaaaaaagctattgctgct
ttaaatgggaatgttcttgcccctgataagtctgcaaagatctcagccgtttctgaaata
aaagacacactactatcatcgttgggaactaatcaaagtgcgttttgtgaagctcacgga
ttaacaccatttgatttaagaataatggctgttcaaatcatacgtgctattcgctcagaa
atgataactaatgaaaattctttcgccatttttgttaaagatacatttggctatattata
aaaaatgatattcctttcaaattagaaaacctgcgtcaaatcatcgtttctaataccaat
gcagaagccataatggtttcaaatattcataggtttaaaggacttgaattagatgccatc
cttgcagtagcaaaaaatgaagccgagctcaatctatggttggaaacgagtacagatttc
agagatgcacattctgacaggggaacaagtgattatcccaggttaggttatgttgctttt
agcagagcaagaaaagtattatgcattgcttgtttagagtccatttcagataatacaaaa
caaaagttaaataatttgggtgttgaaatcgatacaccaaccctacagtttcccagctta
atttaa
DBGET
integrated database retrieval system
