Zunongwangia profunda: ZPR_1841
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Entry
ZPR_1841 CDS
T01216
Name
(GenBank) DNA topoisomerase I-like protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
zpr
Zunongwangia profunda
Brite
KEGG Orthology (KO) [BR:
zpr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zpr03032
]
ZPR_1841
03400 DNA repair and recombination proteins [BR:
zpr03400
]
ZPR_1841
Enzymes [BR:
zpr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
ZPR_1841
DNA replication proteins [BR:
zpr03032
]
Prokaryotic type
DNA Topoisomerases
ZPR_1841
DNA repair and recombination proteins [BR:
zpr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
ZPR_1841
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
KilA-N
Motif
Other DBs
NCBI-ProteinID:
ADF52171
UniProt:
D5B986
LinkDB
All DBs
Position
complement(1980432..1981508)
Genome browser
AA seq
358 aa
AA seq
DB search
MVLSPEDIDVILEDPSEAAKLANLTYVSEHHLSIKRKKAGRGFSYFKEEKRIKDSKIIER
IKSLVIPPAWTQVNISNLENGHLQVVGRDEKRRKQYIYHPLWSKMKNETKFFKMTAFGKK
LPQIRKKVDADLDLPGMCKQKVLALIIRLMEETHIRIGNDYYAQKNKTYGLSTFRTRHVK
TYDDEVKFEFVGKKGKEHSISVQNKELIKLINQCEDIPGWELFKFYDENGEKHTIDSGMI
NDYIHAIAGELFSAKDFRTWAASKIFFETLKELGYIEDEKENKKTILTSFDAAASGLGNT
RAVCRSYYVHPKIVEAYADGSIVPYFNKVKNESVKDYTKLSETEKVMLNLIEDYEIRI
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
atggtattatccccggaagatatagatgtaattttagaagatccttcagaagcggcaaaa
ttagccaatctcacctatgtttcagagcatcatctttccataaaacgtaaaaaagcaggg
cgcggcttctcttattttaaggaagaaaaaagaattaaggattctaaaattatagaacgt
atcaaaagtctggtcattccaccggcatggacacaggtaaatatttctaatttggaaaac
ggacatttacaggtcgtgggaagagatgagaaaaggcggaaacagtacatttaccatcca
ttatggtcaaaaatgaaaaatgaaactaaattttttaaaatgaccgctttcggaaaaaaa
ttacctcaaataaggaaaaaagtagatgctgatcttgatctccccggaatgtgtaaacaa
aaagtcctggctctaatcattagacttatggaagaaacgcatatcagaattggaaacgac
tattatgcgcagaaaaacaaaacttatggattatctacttttcgcacccgccatgtaaaa
acctatgatgatgaagtgaaatttgaatttgtcggaaaaaaaggaaaagaacattctatt
agcgttcagaataaagagttgatcaagctgattaatcaatgtgaagacatcccaggctgg
gaactctttaaattttacgatgaaaatggtgaaaagcatactattgatagtggaatgatc
aatgattatatacatgcaatagctggagaactattttcagcaaaagactttagaacatgg
gctgcttccaaaattttctttgaaacactaaaagaactgggatatattgaagatgaaaaa
gaaaataaaaaaacaattttaacttcttttgatgccgccgccagtggattaggtaatacc
cgcgctgtttgcagaagctattatgtacacccaaaaattgtggaagcttatgcagatggt
agtattgtcccctattttaacaaagtaaaaaatgaaagtgtaaaagattacaccaaactt
tctgagaccgaaaaagtaatgttaaacttaattgaggattatgaaataaggatataa
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