| Entry |
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| Name |
(GenBank) ATP-dependent DNA helicase RecQ
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| KO |
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| Organism |
zpr Zunongwangia profunda
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:zpr00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ZPR_2009
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:zpr03019]
ZPR_2009
03400 DNA repair and recombination proteins [BR:zpr03400]
ZPR_2009
Enzymes [BR:zpr01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ZPR_2009
Messenger RNA biogenesis [BR:zpr03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ZPR_2009
DNA repair and recombination proteins [BR:zpr03400]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ZPR_2009
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(2155637..2157745)
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| AA seq |
702 aa
MEKQQLLNTLKEYFGYDSFRPLQEKIIQSIFDGKDNLVIMPTGGGKSICYQLPAILLPKL
TIVISPLIALMKDQVDGLKANGIKAEFLNSSQQVADQESIFQKIDKNELKLLYVAPESLQ
ILDRFLTEENISLIAIDEAHCISSWGHDFRPAYTQLGYLKKRFSNTPIIALTATADKATR
HDICQQLNIPDAKKHISSFDRKNLSLEVRQGIKRFEQIIKFIKSRPSESGIIYCLSRKNT
EELAEKLQQKGLDAKAYHAGLKHEERESIQDDFINDKTEIICATVAFGMGIDKSNIRWVI
HYNMPKNLEGYYQEIGRAGRDGLSSDTLLFHSYADVVQLQRFAENTKNKDIQVAKLDRMK
QYAEALTCRRKILLSYFGEIKQENCGNCDICKNPPQFFDGTVASQKALSCIYRLKGKEPI
TTVVDVLRGSQNEQTLSKNYNRLKTYGIGKDISWNNWQQYILQLINLGYAEIAFHQGNAL
KLTKHAKDVLFEGKKVHLAKVPDRKLQAAAENNASEKVAVENSLFEKLRQLRLDIAREEE
IPAYLIFNDATLKEMERARPMTDDDFMLINGVGRKKMEEYGYRFIKEIIAFSKQKRTRKK
QKKGKTYKITGEMYAKGKTPEEIAKERELSEITIMSHLLKLYDEGESIDLNQFIGKADLD
AVRKAKKTLGDPDKLKPYFEHFEEAIPYNAIKIALKIIENEQ |
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| NT seq |
2109 nt +upstreamnt +downstreamnt
atggagaaacagcagttgcttaatacacttaaagaatattttggttacgatagttttaga
cctttacaggaaaagattatccagtctattttcgacgggaaagacaatcttgtaattatg
ccaaccggtggcggtaaatctatatgctatcaattaccggcaatccttttgcccaaacta
acgattgttatctctccgctcatcgctttaatgaaagaccaggtagacggattaaaagct
aatggcattaaagccgaatttttaaatagtagtcagcaggtagcagatcaggaaagtatt
tttcagaaaatcgataaaaacgaactgaaattactgtatgtggctcctgagagtttacag
atcttagatcgatttttaaccgaagaaaatataagtttaatagccattgacgaagctcac
tgtatttctagctgggggcacgattttagaccggcctatacacaacttgggtatttaaaa
aaaaggttttctaatactcccataatagcattaaccgccacggccgataaagccaccaga
cacgatatttgccagcaattaaatatccctgatgccaaaaaacatatttcttctttcgac
cgtaaaaatttaagtctcgaagttcgtcagggcatcaaacgattcgaacagattataaaa
ttcataaaaagcagacctagcgaaagtggaatcatttattgccttagccgaaaaaacact
gaagaactcgccgaaaaacttcagcaaaaaggtttagatgcaaaagcctatcatgcaggt
ctaaaacatgaagaacgggaaagcatacaggacgatttcatcaacgataagaccgaaatt
atttgtgcaaccgtggcctttgggatgggtattgataaatcgaatattcgttgggttatt
cattacaatatgccaaaaaacctggagggctattatcaggaaattggccgtgccggtcgt
gatgggctgtcctcagacaccttactatttcatagttatgctgatgtggtacaattgcaa
cgctttgccgaaaacacgaaaaataaagacattcaggtagccaagttagaccgcatgaaa
cagtatgcggaggcgcttacctgccgccgaaaaattttactaagttattttggtgaaatt
aaacaagagaattgtggcaattgtgatatttgtaaaaatccgcctcagtttttcgatggt
actgttgcctcccaaaaagccttatcctgcatctaccgcttaaaaggaaaagagcccatc
actaccgtcgtagatgttttacgcggtagccagaatgaacaaacactgtccaaaaattat
aaccgtctaaaaacctatggtattggtaaggatatctcctggaataactggcagcaatat
atcctacagcttattaatttaggatatgctgaaattgcttttcatcagggaaatgccttg
aaattaaccaaacacgctaaagacgtactttttgaaggaaaaaaggtacatttagctaaa
gttcccgaccgtaaattgcaagcagcagccgaaaataacgcttcagaaaaggttgctgtt
gaaaattcacttttcgaaaaattaaggcaacttaggctcgatatcgcaagggaagaagaa
ataccggcttatcttatttttaatgatgctacactaaaagagatggagcgcgcacgcccc
atgaccgatgatgattttatgctgattaacggagtgggacgaaagaaaatggaagaatat
ggttatcgctttatcaaggagatcattgcattttcaaagcaaaaaagaacccgcaaaaag
cagaaaaaaggaaaaacttataaaattacgggcgaaatgtatgctaaaggcaaaacaccc
gaagaaattgccaaagagcgggaactttctgaaataacgattatgtcgcacctgctaaaa
ctctatgatgaaggggagtctatagatttaaatcaatttattggaaaagccgatcttgac
gcagttaggaaagctaaaaaaacactcggtgatcctgataaattaaagccttatttcgag
cattttgaagaagcgattccgtacaacgccataaaaattgcacttaaaattatcgaaaat
gaacagtaa |
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