Zunongwangia profunda: ZPR_2118
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Entry
ZPR_2118 CDS
T01216
Name
(GenBank) primosomal protein N' (replication factor Y)
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
zpr
Zunongwangia profunda
Pathway
zpr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
zpr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ZPR_2118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zpr03400
]
ZPR_2118
Enzymes [BR:
zpr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ZPR_2118
DNA repair and recombination proteins [BR:
zpr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ZPR_2118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
ResIII
Zn_ribbon_PriA
Helicase_C
PriA_C
Cas3-like_C_2
nSTAND3
Zn_Ribbon_TF
NTPase_P4
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
ADF52443
UniProt:
D5BAT0
LinkDB
All DBs
Position
2269727..2272180
Genome browser
AA seq
817 aa
AA seq
DB search
MPNFVDVILPLPLDNRFTYTISEEEAVFLQNGMRVAVPFGKSKVYTGIIAEVHNRAPEVY
EAKPINQILDETPLVTQNQLEFWKWIASYYMCTEGEVMRAALPGAFILESEHIVQLQKEA
EFNESDLKDDEFLVVEALQNQSSLKIKEVEALLDKKSVLPILNRLMAKDIVVLSQEIYEQ
YKPKRVKYIKLHESYESEDAMHQLLDELSRAHKQREVVLNYFSLKAKSLKPINAKELQKI
SGTTASVLKSLVSKNIFKEYYLNEDRVAFEGEITRSHIEFNEYQLKAFGQIKAAFEEKTV
CLLHGVTSSGKTEIYLKLIEEVLNEGKQALYLLPEIALTTQLINRLQAYFGDKVLVFHSK
YSMNERVEVYQNVLKAGEGPKVVIGARSAIFLPFQQLGLVIIDEEHESSFKQYDPAPRYH
ARDAAVVLANLFKAKTLMGSATPSLESYYNAVHDKYGFAELSRRFGNVMMPEIEIVDIKE
KHRKKRMTGHFSDRLLKEIEESLAEGEQIILFQNRRGFSPILECNTCGHSPQCPNCDVSL
TYHSHSNQLRCHYCGYHIAMQKRCMACHSDDISTKGFGTEQIETELKALYPDHKIGRMDQ
DTTRGKHGYEKIITAFEDLEIDILVGTQMLTKGLDFRNVNLVGVMNADNLLNFPDFRAHE
RSFQLMLQVAGRAGRTKKRGKVLIQSYNPHHQIIQQVSTNDYAGMYKEQLQERYNYKYPP
YFRLVRLSLKSRDFSKTNEAADWIAKAMQNVFKQNVLGPEFPPVARIRNEYYKNIMLKIP
QNQSLGKTKAVLYKILISFNAISAYRSVRVIVNVDPM
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgcccaattttgtagatgttattttaccccttcctctagataataggtttacttacact
atttctgaagaagaagcagtttttttacaaaacgggatgcgggtagcggtaccctttggg
aaatctaaagtatatactggtatcattgctgaagttcacaatcgtgcgccagaagtttac
gaagctaaacctataaatcagatattagatgaaactcctctggtgactcaaaatcagtta
gaattttggaaatggatagcctcctattatatgtgtactgaaggtgaagtgatgagagcg
gccctaccgggtgcctttattttggaaagtgaacatattgtccagttacaaaaagaggcc
gaatttaacgaatctgatcttaaagatgatgaatttttggtggtggaagctctacaaaat
cagtcatcattaaaaattaaagaagttgaagccttactcgataaaaaatcggtactacca
attttaaaccgattaatggctaaggatattgtagtacttagccaggaaatttatgagcaa
tacaaacccaagcgagttaaatatatcaaactgcacgagagttatgaatctgaggatgct
atgcatcagcttttagatgaactttcacgtgctcacaagcaacgggaagtagttttgaat
tatttcagcttaaaggcaaaaagcctaaagccaattaatgctaaagaactgcaaaaaata
tctggaactactgctagtgtattgaaaagtctggtctccaaaaatattttcaaggaatac
taccttaatgaagatcgtgttgcttttgaaggggaaattacgagaagccatatcgaattt
aacgaatatcagcttaaagcatttggacaaattaaagccgcttttgaagaaaaaacagta
tgcttattacacggggtgacctctagtgggaaaactgaaatttatctaaaacttattgaa
gaagttttaaatgaaggtaagcaggcgctttatttattacctgagattgctttgacaaca
caattgatcaatcggcttcaggcgtattttggcgataaagttttagtgtttcatagtaag
tactctatgaacgaaagggtagaagtttatcaaaatgtacttaaggccggggagggacca
aaagtagtcattggcgcaagatcagctattttcttaccctttcaacaactgggcttggtc
atcatagacgaagagcacgaatcttcttttaaacaatatgatccggcgcccagatatcac
gcacgtgatgctgcggtagttttggctaatctttttaaagcaaaaactttaatgggatct
gccacaccatctttagaatcttattataatgcagtacatgataaatatggttttgcagaa
ttatcaagacgttttggaaatgtaatgatgccggaaattgaaattgtggatatcaaagaa
aagcatcgaaaaaaaagaatgactggtcacttttcagatcgcttgttaaaagaaatcgag
gaatctctggctgaaggtgagcagattattttatttcaaaatagaagaggattttcgcca
attttagaatgtaatacctgtgggcactcgccacaatgtcctaattgtgatgttagttta
acctatcacagccatagcaaccagctacgctgtcattattgtgggtatcatatcgctatg
caaaagcgttgtatggcttgtcatagtgatgatatttcaaccaaaggctttggtacagaa
caaattgaaaccgaattaaaagcattatatcctgatcataaaattggaaggatggatcag
gataccaccagaggaaaacacggttacgaaaaaattattaccgccttcgaagatttggag
atcgatattttggtgggaactcaaatgcttaccaagggattggattttagaaatgttaac
ctggtaggggtaatgaatgctgataatcttttaaatttcccagattttagggcgcatgag
cgaagtttccagttaatgctacaggtggcaggaagagcggggagaacgaaaaagagaggg
aaagtattgattcagagttataatcctcatcatcaaattattcagcaggtttctacaaat
gattatgcgggaatgtataaggaacaactgcaggaacgctataattataaatatcctcca
tattttagattggtgcgtttaagcctaaaatctcgggattttagtaaaacgaatgaagca
gccgattggatcgctaaggcgatgcaaaatgtttttaagcaaaatgtgttggggccggaa
tttcccccggtagccaggatacgcaacgaatactataagaatattatgcttaaaattcca
caaaatcagtctttaggaaaaactaaagctgtgctttataaaattttgataagttttaat
gcaatttcagcttatcgcagcgttagggttattgtaaatgtagaccctatgtag
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