Zunongwangia profunda: ZPR_3850
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Entry
ZPR_3850 CDS
T01216
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
zpr
Zunongwangia profunda
Pathway
zpr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
zpr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ZPR_3850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zpr03021
]
ZPR_3850
03400 DNA repair and recombination proteins [BR:
zpr03400
]
ZPR_3850
Enzymes [BR:
zpr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ZPR_3850
Transcription machinery [BR:
zpr03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ZPR_3850
DNA repair and recombination proteins [BR:
zpr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ZPR_3850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
ADF54156
UniProt:
D5BM16
LinkDB
All DBs
Position
complement(4157821..4158813)
Genome browser
AA seq
330 aa
AA seq
DB search
MAILNFQKPDKVIMIDSTDFEGKFEFRPLEPGYGLTVGNALRRVLLSSLEGFAITSVRIE
GVDHEFSTIPGVVEDVTEIILNLKQVRFKRQIDEIDNEAVTISVSGEEELTAGHFQKFIS
GFQVLNPELVICHLDSKVNINMEITIEKGRGYVPAEENKKANAPLGTIFTDSIYTPIKNV
KYSIENYRVEQKTDYEKLVFEIISDGSIHPKDALTEAAKTLIHHFMLFSDERITLEADEI
AQTETYDEESLHMRQLLKTKLVDMDLSVRALNCLKAAEVDTLGDLVSYNKNDLMKFRNFG
KKSLTELEELVSNKGLNFGMDLSKYKLDKD
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggcaatactaaattttcagaagcccgataaagttataatgattgactctacagatttc
gaagggaaatttgaatttcgtcctttggagcctggatatgggttaaccgttggtaacgct
ttaagaagagtgctgttatcatctttagagggattcgcgatcacttcggttcgtatcgaa
ggcgttgatcacgaattctcaacaattcctggagttgtggaagatgttacagaaataata
ttgaatctaaagcaagttagattcaaaaggcaaattgatgaaatagataacgaagccgtt
acaatttctgtttctggtgaagaagaattaaccgctggtcatttccagaaatttatttct
ggttttcaggtacttaatcctgaattagtaatatgccatcttgatagcaaagttaatatc
aatatggagattactattgaaaagggtagaggttatgttccggcagaagaaaataaaaag
gccaatgctcctttaggcactatttttaccgattctatttacactccaattaagaatgtg
aaatatagtatcgaaaattatcgtgtagaacaaaaaactgattacgaaaaacttgttttc
gaaattattagtgatggttctattcatcctaaagatgcgttaactgaagctgccaagacg
ttaattcaccatttcatgttgttctctgatgagcgtattacgttagaggctgatgaaata
gctcaaaccgaaacttatgatgaagaatctcttcacatgagacagctgctaaaaactaaa
ttagtggatatggatctttcggtaagagcattaaattgtttaaaagcggctgaagttgat
accttaggtgatcttgtttcttacaataaaaatgatcttatgaagttccgtaacttcggt
aagaaatcattaacagagcttgaagagctggtaagtaacaaaggattaaactttggtatg
gatctttcaaaatataaattagataaggactaa
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