Zunongwangia profunda: ZPR_4298
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Entry
ZPR_4298 CDS
T01216
Name
(GenBank) Holliday junction resolvase
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
zpr
Zunongwangia profunda
Pathway
zpr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
zpr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ZPR_4298
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
zpr03400
]
ZPR_4298
Enzymes [BR:
zpr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
ZPR_4298
DNA repair and recombination proteins [BR:
zpr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ZPR_4298
RecFOR pathway proteins
ZPR_4298
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
DUF460
Motif
Other DBs
NCBI-ProteinID:
ADF54600
UniProt:
D5BB60
LinkDB
All DBs
Position
complement(4612458..4613006)
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AA seq
182 aa
AA seq
DB search
MSEKIILGIDPGTTIMGFGLIKVKNKNMEFLQLNELQLKKYDDHYVKLKLIFERTIQLID
TFHPDEIAIEAPFFGKNVQSMLKLGRAQGVAMAAGLSREIPITEYLPKKIKMAITGNGNA
SKEQVAKMLQSMLKLKSLPKNLDSTDGLAAAVCHFYNSGQPNIGKSYTGWDAFVKQNPDK
IR
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgaaaagatcattttaggaatcgaccctggaaccaccattatggggtttggattg
ataaaggtgaagaataagaatatggagtttttgcagctgaatgagcttcagctaaaaaag
tatgatgatcactacgtaaaacttaaattgatctttgaaagaaccatacagcttattgat
acgtttcatcccgatgaaatcgctattgaagcgccgttctttgggaaaaatgtacaatcc
atgctaaagttgggtagagcacagggagttgcgatggcagcaggactttcacgtgaaatc
ccgattaccgaatatttgccaaaaaaaataaaaatggccataaccggaaacggaaatgcc
agtaaagaacaggtcgctaaaatgctgcaaagcatgctgaagttaaaatccctgcctaaa
aacctggattctaccgatggtcttgccgctgcagtttgccatttttataattctggacaa
ccaaatattggtaaaagttacactggctgggacgcgtttgtcaagcaaaatccagacaaa
attcggtaa
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