Zunongwangia profunda: ZPR_4442
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Entry
ZPR_4442 CDS
T01216
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
zpr
Zunongwangia profunda
Brite
KEGG Orthology (KO) [BR:
zpr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
zpr03016
]
ZPR_4442
Enzymes [BR:
zpr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ZPR_4442
Transfer RNA biogenesis [BR:
zpr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ZPR_4442
Prokaryotic type
ZPR_4442
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
DUF2130
Motif
Other DBs
NCBI-ProteinID:
ADF54743
UniProt:
D5BCB7
LinkDB
All DBs
Position
4792017..4792736
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AA seq
239 aa
AA seq
DB search
MDHPIITAEEFKTGQILLFDKPLNWTSFQLVNKVRWMIRKSCDIKKIKVGHAGTLDPLAT
GLLIICTGKFTKRIPELQGQIKEYTGTFCLGSTTASYDLETEIDETFPIDHITEENIAET
TKSFIGDIEQLPPVFSALKKDGKRLYEYARKGEEVEIKPRTISIEAFETDASDFPDINFR
VVCSKGTYIRSLAHDFGKKLNSGAHLSSLRRTKIGDFSIENSLGLDDFEKQLPRPVSGA
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atggatcatccaattattactgcagaagaatttaaaacagggcaaatcttactttttgac
aagcccttaaactggacgtcttttcagttagtgaataaagtacgatggatgattcgcaaa
agctgtgatattaaaaagattaaagtaggccatgcaggaactttggatcctttagcaaca
ggacttttaattatttgcacggggaaattcactaaaagaataccagaacttcagggccaa
attaaagaatataccggtactttttgccttgggtccactacagcttcttacgacctggaa
accgaaatcgacgaaacgttccccatagatcacattaccgaagaaaatatagcagaaact
acaaaaagttttattggcgatattgaacaattgcctccggtattttctgcattaaaaaag
gacggaaaacgactttatgaatatgcccgtaaaggagaggaggttgaaataaaaccaaga
accataagtattgaagcatttgaaactgatgcttcagactttccagatattaactttaga
gtagtttgtagtaaagggacttacataagaagtcttgcccacgatttcggaaaaaaattg
aatagcggtgcgcacctttcttcattaagaagaacaaaaattggtgatttttctatagaa
aacagtttaggccttgatgattttgaaaagcaattaccaagacctgtttcaggtgcttaa
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