Zygosaccharomyces rouxii: ZYRO0A03476g
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Entry
ZYRO0A03476g CDS
T01118
Name
(RefSeq) ATP-dependent RNA helicase FAL1
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
zro
Zygosaccharomyces rouxii
Pathway
zro03013
Nucleocytoplasmic transport
zro03015
mRNA surveillance pathway
zro03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zro00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
ZYRO0A03476g
09122 Translation
03013 Nucleocytoplasmic transport
ZYRO0A03476g
03015 mRNA surveillance pathway
ZYRO0A03476g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zro03019
]
ZYRO0A03476g
03041 Spliceosome [BR:
zro03041
]
ZYRO0A03476g
03009 Ribosome biogenesis [BR:
zro03009
]
ZYRO0A03476g
03012 Translation factors [BR:
zro03012
]
ZYRO0A03476g
Enzymes [BR:
zro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ZYRO0A03476g
Messenger RNA biogenesis [BR:
zro03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
ZYRO0A03476g
mRNA cycle factors
Stress granule specific factors
ZYRO0A03476g
Spliceosome [BR:
zro03041
]
Complex C
Other components
EJC/TREX
ZYRO0A03476g
Ribosome biogenesis [BR:
zro03009
]
Eukaryotic type
90S particles
Helicases
ZYRO0A03476g
Translation factors [BR:
zro03012
]
Eukaryotic type
Initiation factors
eIF-4
ZYRO0A03476g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
CMS1
AAA_30
PhoH
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
8201642
NCBI-ProteinID:
XP_002494521
UniProt:
C5DPH7
LinkDB
All DBs
Position
A:complement(277585..278784)
Genome browser
AA seq
399 aa
AA seq
DB search
MSFNREDDSRLKFKTSKKLRVSPTFEAMNLKDDLLRGIYSYGFEAPSSIQSRAITQIISG
KDVIAQAQSGTGKTATFTIGMLQVLELKRKDLQALVLSPTRELASQSCQVVSNLGDYLNV
KAFALTGGKALKDDLKRIQSSGCHVVSGTPGRVLDLIKRQVVQTRNVQVLVLDEADELLS
ETLGFKQQIYDIFARLPPGCQVVVVSATMSRDILEVTKKFMSDPVKILVKRDEISLEGIS
QYYVDVSKEEWKFDTLCDLYDSLTITQCVIFCNTRKKVDWLSKKLIQSNFAVVSMHGDMK
QEDRDKVMNDFRTGHSRVLISTDVWARGIDVQQISLVINYDMPEIMENYIHRIGRSGRFG
RKGVAVNFITREDSSKLKATEKMYGIKIKPMPANLSELS
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcaatagagaagatgatagcaggttgaaattcaagacttctaagaagctcagg
gtatcgcctacctttgaggctatgaacttgaaggatgaccttcttcgaggcatatattca
tatggatttgaagcaccatcttctattcaatctcgagccatcacgcagatcatttctggt
aaggatgttattgcacaagcacaatccggtactggtaagactgcgacttttaccattggt
atgttacaagtgctcgaactaaaacgtaaggatttacaggctttggttctttcacctaca
agagaattagcatctcagagttgccaggtggtgtccaatttgggggattaccttaatgtg
aaagcctttgcattaaccggtgggaaggccttgaaggacgacttgaaaagaattcaaagt
agtggttgccatgtagtcagcggtactccgggacgtgtattagatttaataaaaagacaa
gtggttcaaactagaaatgtacaagtgttggtattagatgaagccgatgagttattaagt
gagactttgggtttcaagcagcaaatttacgatatttttgctcgtctgccgcctggatgc
caagtggtagtcgtaagtgctaccatgagtagagatattttagaagtgactaaaaaattc
atgagtgatcccgtcaagattttggttaaaagagatgagatttccttagaaggtatctca
cagtattacgtggatgttagtaaagaggaatggaagtttgatacattatgtgatttatac
gattcattgaccattactcaatgtgttatattttgcaataccaggaagaaggtagattgg
ctatcgaaaaagttgatccaatccaattttgcagtcgtttccatgcacggtgacatgaag
caggaggacagagataaagtgatgaacgatttcagaactggacattccagagttttaata
tccacagacgtttgggcgcgtggtattgatgtgcaacagatttcactggtgattaactac
gatatgccagaaatcatggaaaactatatccatcgtattggtagaagtggtagatttggt
agaaaaggtgttgccgtgaatttcattacaagggaagattcatctaaattgaaagctact
gaaaaaatgtatgggatcaaaattaaacccatgccagcaaacctttcagaattgtcgtga
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