Zygosaccharomyces rouxii: ZYRO0A11176g
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Entry
ZYRO0A11176g CDS
T01118
Name
(RefSeq) TFIIH/NER complex subunit SSL1
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
zro
Zygosaccharomyces rouxii
Pathway
zro03022
Basal transcription factors
zro03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
zro00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
ZYRO0A11176g
09124 Replication and repair
03420 Nucleotide excision repair
ZYRO0A11176g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zro03021
]
ZYRO0A11176g
03400 DNA repair and recombination proteins [BR:
zro03400
]
ZYRO0A11176g
Transcription machinery [BR:
zro03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
ZYRO0A11176g
DNA repair and recombination proteins [BR:
zro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
ZYRO0A11176g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
VWA
Motif
Other DBs
NCBI-GeneID:
8202052
NCBI-ProteinID:
XP_002494853
UniProt:
C5DQF9
LinkDB
All DBs
Position
A:complement(896333..897766)
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AA seq
477 aa
AA seq
DB search
MPPVIDPESDEDEEQVQVSSKETRRHKRELDQDEENDNDDDEGDVKSGSKSSSNPKDRNG
KASKDPKRNGRSARRNKTSNKALQGASGGYAWEDEIKRSWDLVPADDEGDMAALAASIVE
SRKKRTAQKNISPYQRGIIRTLILVLDCSEAMLEKDMRPNRHAMLVQYSIDFVHEFFDQN
PISQIGIVSMRNGLAHMISQVSGNPQDHVDALKSIRKQEPKGNPSLQNALEMTRGLLLPV
PPHCTKEVLIVFGSLSSTDPGDIHLTIGSLVQEGIRVKIIGLSAQVAICRELCKATNYGD
ESFYKVPLDEIHCKELFAEAVTPLPVNKINKGFTLVKMGFPTRIFEEAPTFCACHSKLLY
GGYFCPNCQSKVCSLPMVCPCCDLMLILSTHLARSYHHLMPLKTFSEVPTGQVFPTENCF
SCQVRFPTVKNHKTGELLTSSRYRCEDCLKDFCIDCDVFIHEILHNCPGCESKPTIT
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgccgccagtaatcgatcctgaatctgatgaagacgaggaacaagttcaagtttcctcc
aaggaaactagaagacacaagagggaattagaccaagacgaagagaatgataatgatgat
gatgaaggcgacgtaaaaagtggatctaaatcttcatcaaaccctaaagatcgtaatggg
aaagctagtaaagatccaaaacgtaatggtagaagtgcaagaaggaataagacgtctaat
aaggcattacaaggtgcaagcggtggttatgcatgggaagacgagattaagagaagttgg
gatttagtgccagctgatgatgaaggtgatatggcagcattagcggctagcatagtagag
tccagaaagaaaaggactgcacaaaaaaatattagtccgtatcaaagaggtattattaga
acgttaatacttgtattggattgtagtgaagcgatgttagaaaaggacatgagacctaat
aggcatgccatgttggtccagtactctattgatttcgttcatgaattttttgatcaaaat
cctatttcacagattggtatcgttagcatgcgtaatggcttggcacatatgattagtcaa
gttagtggtaacccacaggatcatgtagacgctttgaaatcaattaggaagcaggagcca
aaaggtaatccatctttacagaatgcattagaaatgacaagggggttgctgttgccggtg
ccgcctcattgtactaaggaagttcttatagtctttggttcactgtcgagtacagaccct
ggtgatattcatctaacgattggatcactagtgcaagaaggtatacgtgtaaagattatt
ggtctgtcggcacaggttgctatttgtcgagaattgtgtaaggcaaccaattatggtgat
gagtcgttttacaaagtgcctctggatgagattcattgtaaagaattatttgctgaggca
gtgacgccgcttccagttaataaaatcaataaaggtttcacgttggttaagatgggcttt
cctacgagaattttcgaagaagcgcccaccttttgtgcatgccattctaaactgttgtat
ggtggatatttttgtccaaactgccaaagtaaagtatgctcactgccgatggtttgtcct
tgttgtgatttaatgttaatattgtctacccatttagcgagatcctatcaccatctaatg
ccgttgaaaactttctcagaagtacctactggacaagtatttccaacggaaaattgtttc
agttgtcaagtgagattccctaccgttaaaaatcataaaaccggtgaacttctaaccagt
tctaggtatagatgtgaagactgtctcaaagatttttgcattgattgtgatgtctttatt
catgaaattttgcataattgccccggttgtgaatctaaaccaaccataacgtga
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