Zygosaccharomyces rouxii: ZYRO0A11814g
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Entry
ZYRO0A11814g CDS
T01118
Name
(RefSeq) DEAH-box RNA helicase PRP16
KO
K12815
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX38/PRP16 [EC:
5.6.2.6
]
Organism
zro
Zygosaccharomyces rouxii
Pathway
zro03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zro00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
ZYRO0A11814g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zro03041
]
ZYRO0A11814g
Enzymes [BR:
zro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ZYRO0A11814g
Spliceosome [BR:
zro03041
]
Complex C
Other components
Step II factors
ZYRO0A11814g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
AAA_22
HA2_N
AAA_19
nSTAND3
AAA_30
PhoH
SLFN-g3_helicase
SRP54
ABC_tran
Herpes_ori_bp
T2SSE
Reprolysin
AAA_29
Flavi_DEAD
AAA_23
ResIII
Motif
Other DBs
NCBI-GeneID:
8201488
NCBI-ProteinID:
XP_002494879
UniProt:
C5DNV5
LinkDB
All DBs
Position
A:950029..953286
Genome browser
AA seq
1085 aa
AA seq
DB search
MSDDEELIRFVQEHRSSTVTSNFIKTLRKLVENCRGDSNKFVAGCKALGGFQGQDEFLGT
LFVRLNGRKAIPLPPVKRKIRLQLDLDEDEDENEDGEEQDIPLFKPKRNPSQFKRIDKNT
AQKLKEFNKDAAVLKDKDKQQISTTTEEDKSGTSIGMPKLQAVSDNEEEDQEESGNDTDG
SVVSEDSVAEDREWYNYDDDYGNPVTEEPAKDMDFKNPVQSYKNFKMPTTSVQLYTMPVS
QRKQFLPPFLKKNYQLQGVTDATIVGSFLDSPLSGLVNPFKNPDGELSVSAKKGSHLVAL
RRLQKDKTQRSREAADVVGTALGDVLGLKEKDQNQTAVDVSNDATDQEVSSREDILQARK
SLPAYAMRSQIIQTIRDNQVTIIIGETGSGKTTQLAQYLDEAGICQSGKSIGCTQPRRVA
AMSVAKRVALEMGVELGQEVGYSIRFEDCTSNKTKIKFMTDGILLREALMDHTLEKYDCI
IIDEAHERSLNTDVILGLFKRLLARRRDIKLIITSATINATKFADFFGGAPLCTIPGRTF
PIQIIYSKHPVSDYVEASVMQAIRIHLSADVDAGDILIFMTGQEDIEATNDALREKLTEV
YSKSMGITRYDEINNVEIFPIYSALPADVQSRIFKKLESGKRKIVISTNIAETSLTIDGI
RYVVDCGFSKLKVYNPKIGLDSLTITPISRANADQRSGRAGRTGPGTAYRMYTEDAAYDD
MYSQAIPEIQRTNLSNTVLLLKSLHVDDILKFPFIDPPPLQTLLASLYELHFLGALDNFG
NLTSLGTEMSKLPLRPSLSKALLISARNGCSEEMVTIVSMLSVPIVFYRPTERQKESDQA
RSRFFVPESDHLTFLNVYSQWKSNRYSHRWCGRHFLQYRSLQRARDIRVQLVKIMQSQGI
PLVSSGTEWDIVRRCICSGFAHQAAKISGLGKYVHLKTGMEVQLHPTSALYGMGDLPPFV
VYNELLMTTKEYISCVTSVDPFWLMDYGGLLYDIKRIKEIDNNDVKGFFQLVDEPQERED
EPDELDLRMKDCLAARDRVIRRLEESDKKFAQQNSDSLRSSSSSSSNKRDTDKSVQIGFK
RRRPF
NT seq
3258 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgatgaagagcttatcaggtttgtccaagaacatagaagctcgacggttact
tcaaattttatcaagacgctaaggaaattggttgagaactgtcgaggtgactctaacaag
tttgtagctggatgcaaagctcttggtggatttcaaggtcaagatgagtttttagggaca
ttgtttgtcagattaaatggtagaaaggcgattccactgccgcctgttaagcgcaagatt
cgattacagttggatttagatgaagacgaagacgaaaatgaagatggagaagagcaagat
ataccactgttcaaacccaagaggaatccctcgcagttcaaaaggattgataagaatact
gcacagaaactgaaagagtttaacaaggatgctgcagtgttaaaagataaggataagcaa
caaataagcacaaccacagaagaggataaatctggtacttcaattggtatgcctaagctt
caagcagtctctgataatgaagaggaggatcaagaagagtctggtaatgatactgatgga
tctgttgtttccgaagattctgtagccgaggatagagaatggtacaattatgacgatgac
tacggcaatccagtgacagaggaaccagccaaagacatggattttaagaaccctgtacaa
tcttacaaaaatttcaaaatgcctacgacttcggtacagttgtacaccatgcccgtcagt
cagagaaagcagtttttacctccatttctcaaaaaaaattatcagttacaaggtgttact
gatgcgacgatcgttggttctttcctcgattcccctttgagtggattggtgaatccattt
aagaatccagatggtgaactgtccgtcagcgccaaaaagggtagtcatttagtagctctt
cgacgtctacagaaggataagactcaaagatcaagagaagccgccgatgtggtggggacc
gcactaggtgatgttttgggactcaaggaaaaggaccagaatcaaactgctgtcgatgta
tctaatgatgctacagaccaagaggtatcttcaagagaggatattttacaagctcgtaaa
tccctccctgcttatgcgatgagatctcaaatcatacaaacgattagagataatcaagtg
actattattattggtgaaactgggtctggtaagacaacgcagttggctcaatatttggat
gaagctggtatttgtcaaagcggtaaatctataggatgtacccaaccacgtagagtggca
gcgatgtctgtggctaaaagagttgcattggaaatgggtgttgaattgggtcaggaagtc
gggtactccattagattcgaagactgtacttctaataaaacaaaaatcaaattcatgaca
gacggtatacttttgcgtgaagcattgatggatcatactttggaaaaatacgattgtatt
attattgatgaagcgcatgaaaggtctttaaacactgatgtcattttggggttgttcaaa
aggttactggctagaagaagggatattaagctgatcataacatctgctaccataaatgct
acaaaattcgcagatttctttggtggggcacctttgtgcactattccaggtaggactttt
cccattcaaattatttattctaaacatccagtatccgattacgtggaagcctctgtcatg
caggcaatacgtattcatttgtcggcagatgtcgatgcaggtgacatcttaatattcatg
acgggacaagaagatattgaggcaactaatgacgctctacgagagaaattgacagaggtc
tattccaagagtatgggtataacccgttatgatgagattaataatgttgaaatctttcct
atttattctgcactgccagctgatgttcaaagtcgtatctttaagaagttggaatctggt
aagagaaagattgtgatctctaccaacattgccgagacttctttgactatagatggtata
agatacgtggttgattgtggattttccaagttaaaagtttacaacccgaagattggtttg
gatagtttgactattactcctatttcaagagcaaatgctgatcagagatctggtagagct
ggtcgtacagggcctggtaccgcttataggatgtataccgaagatgccgcctacgatgat
atgtacagccaagcaattccggaaattcaaagaactaatttgtccaatacggtacttctt
cttaagtccctacatgtcgacgatatcctaaagttcccgtttatcgatccgcctccgtta
cagactttgttggcatcgttgtacgaattgcattttttgggggcactggataattttggt
aatttaacttccttgggaactgaaatgtccaaactaccattgagaccttcactttctaag
gctttgctcatttctgcaaggaatggttgtagtgaagagatggtcaccatcgtttccatg
ctttcagttccaatcgtattttacaggcctacagagagacagaaagagtcagatcaagct
agaagcaggttcttcgttccagaatctgatcatttaacgttcttgaacgtttattctcag
tggaagagtaacaggtattctcatagatggtgtggtagacattttcttcaataccggtca
ttacaaagagctagagacatcagagtccaactggtcaaaattatgcaatcacaaggaatt
ccattggtttcctcgggtacagaatgggatatcgttcggagatgtatttgttcggggttt
gctcatcaggcggctaaaatatcaggtttaggtaaatatgtccatttgaaaacggggatg
gaagttcagctgcatcctacaagtgcattatatgggatgggtgatcttcctccttttgtt
gtctacaacgagttgctcatgacaactaaggagtacattagctgtgtcacatcggtggat
cctttttggctaatggattatggtggactactctatgacatcaagaggattaaagaaatt
gataataatgatgtaaaggggtttttccaattagttgacgaaccgcaagagagagaggat
gaacctgatgagttagatttaaggatgaaggattgtttagccgctagagatagagtcatt
cgacgtcttgaagaaagcgacaagaaatttgcacaacagaatagcgattcattacgttcg
tcatcgtcatcatcgtcaaacaagagggataccgataaatcggtgcaaattggattcaag
agacgacgtccgttttaa
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integrated database retrieval system
