KEGG   Zygosaccharomyces rouxii: ZYRO0A12980g
Entry
ZYRO0A12980g      CDS       T01118                                 
Name
(RefSeq) chromatin modification protein
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
zro  Zygosaccharomyces rouxii
Pathway
zro03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:zro00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    ZYRO0A12980g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:zro03021]
    ZYRO0A12980g
   03036 Chromosome and associated proteins [BR:zro03036]
    ZYRO0A12980g
Transcription machinery [BR:zro03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     ZYRO0A12980g
   Coactivators
    SAGA/TFTC/STAGA complex
     ZYRO0A12980g
Chromosome and associated proteins [BR:zro03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     ZYRO0A12980g
    STAGA complex
     ZYRO0A12980g
    TFTC complex
     ZYRO0A12980g
    SAGA complex
     ZYRO0A12980g
    SLIK complex
     ZYRO0A12980g
SSDB
Motif
Pfam: WD40_Prp19 WD40 TFIID_NTD2 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_IFT122_1st WD40_MABP1-WDR62_1st ANAPC4_WD40 WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_DCAF4 WD40_RFWD3 Beta-prop_SCAP LisH Beta-prop_EIPR1 Beta-prop_Nup120_160 Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_IFT140_1st PROPPIN PEP5_VPS11_N Beta-prop_WDR19_1st LisH_WDR26 Beta-prop_NWD2_C VPS8_N WDR54 LisH_PAC1
Other DBs
NCBI-GeneID: 8201486
NCBI-ProteinID: XP_002494922
UniProt: C5DNZ8
LinkDB
Position
A:1025863..1028337
AA seq 824 aa
MAQNANSKRPGTPPQGQSQQQQQQQQQQQQPQSQQPQSQQAQSQQQRGQPRPNGPFSASD
LNRIVLEYLNKKGYHRTEAMLRAESGRTLTSPNKQSPANVKTGKLPEPKTTPAGVDKNAK
PVSNPAIPAKRDSSSAVVSEEQLKETTSSENYIRAYSMLKNWVDSSLEIYKPELQYILYP
IFIYLFLILVSKNALHARRFFDRFSPDFKINHSSEINRLFSVNSVDHIKENEVANAFHTN
RYKVTISRTTLNLLLYFLNENEGVGGSLIISAINQHLDPNVVDTVTSKDQLADGIKVIES
SGNADDSDINTAKVKLGPYPRDQEFSKEIETELKIRDEQEKRSDKHTLVQEYKVMNNEPY
EEPTPDIKEEEREKEKEKEKEKEKDKENGEKTETSGTDDKGTDDKDGETEEKEESNETAP
TPKTEEKKPVTKAQQPQLEDANMESPALDALPLPPKTTLDIKLEVQRVKESRDAIKLDNL
QLALPSVCMYTFHNTNRDMTSLEFSDDCRLAAAGFQDSQIKLFSLDGSPLGNRYDPDLPE
DATSKTLVGHSGTVYSTSFSPDNRYLVSSSEDKTVRLWSLDTHSALVSYKGHNHPVWDVK
FSPLGHYFATASHDHTARLWSCDHIYPLRIFAGHLNDVDCVSFHPNGCYLFTGSSDKTCR
MWDIATGDCVRLFLGLTAPVISTCVSPDGRWLSTGSEDGIINVWDIGTGKRLKQMRGHGK
NAIYSLAYCKEGNALISGGADHSVRVWDLKKATTESGPEPEQAFVGYLGDVTGSINQDIK
EYGRRRTVIPTNDLVASFYTKKTPVFKVKFTRSNLALAGGAYRD
NT seq 2475 nt   +upstreamnt  +downstreamnt
atggctcaaaatgctaattcgaagagacctgggactcctccacaagggcagtctcaacag
caacaacagcagcagcagcaacaacaacaaccgcaatctcaacagcctcaatcccagcaa
gctcaatcccagcagcaaagaggtcaaccaaggcccaatggtcccttctcggcttctgat
ttgaacagaatcgttctcgagtatctcaacaagaagggttaccatagaactgaggcaatg
ctaagagcagaaagcggacgtactttaacatcgcccaataagcagtcaccagccaatgtg
aagactggtaaattacctgaaccaaagacaacaccagcaggtgtggataagaatgccaaa
ccggtcagtaatccggccatccccgccaagagagactcgtcgtcagctgtggttagcgag
gagcaattaaaggaaactacctcgtctgagaattacattagagcctattcaatgctcaaa
aattgggtcgattcatcgttagaaatctacaagccggaactgcaatacattctgtatccg
attttcatctatttgtttttaatccttgtctctaagaatgcattacacgcaaggagattt
tttgacagattttcaccagattttaagattaaccacagctcagagattaataggctgttt
agtgtcaattccgtggatcatatcaaggaaaatgaagtggcaaacgcgttccatacaaac
cgttacaaagtaacgatttccaggacgacgttaaacttattactttatttcctcaatgaa
aatgaaggtgtcggtggttcacttattattagcgcaataaatcaacatttggatcccaac
gttgtcgataccgttacttccaaggatcagttagccgacggtatcaaagtgatcgagtct
agtggtaatgctgatgatagcgatattaacacggctaaagttaagttgggaccatatcca
agagatcaagagttttcaaaagaaattgaaactgaattgaaaatcagagatgaacaggag
aagcgctccgataaacatacgcttgtgcaagaatacaaagtcatgaacaatgaaccttac
gaagaacctacgccagatatcaaagaagaagagagggagaaggaaaaggagaaagaaaag
gaaaaggagaaggacaaagaaaatggtgagaaaactgagactagtggtactgatgataaa
ggtactgatgataaggacggtgaaactgaggaaaaggaggaaagtaatgaaaccgctcca
acacctaaaacggaagagaaaaaacctgtgactaaagcccaacagcctcaattggaggat
gcaaacatggaatcaccagcacttgatgcgttaccattaccaccaaaaactactctcgat
attaaattggaagttcaacgtgttaaggaatcaagagacgctataaaattagacaattta
caattggcattaccgagcgtttgtatgtatacgttccacaataccaatagagacatgact
agtctagagtttagcgacgactgccggttagccgccgcaggtttccaagatagtcaaatt
aaattattttcactggatggttcaccactaggtaacaggtatgatccagatttaccagaa
gatgcgacttccaagacgttagtaggtcatagtggtacagtgtattccaccagtttcagc
cctgacaatcgttatttggtctctagttccgaagataaaaccgtacgattgtggtcgttg
gatactcacagtgctttagttagctataaaggtcataatcatccagtgtgggatgtgaaa
ttttcgccgttaggccattattttgcaactgcctctcacgatcataccgctagattatgg
tcttgtgatcacatttacccattgcgtatctttgcaggtcatttaaacgatgtggattgt
gtatcattccatcctaatggttgttacctctttacaggttccagtgataagacctgtaga
atgtgggatattgctactggtgactgcgtaagattattccttggattgactgcaccggtc
atttctacgtgcgtttctcccgatggaagatggttatcaacaggtagtgaagatggtatt
attaacgtctgggatattggtacaggtaaacgtttgaagcaaatgcgtggtcatggtaaa
aatgctatttattctctagcgtactgtaaagaaggtaatgcgctaattagtggtggtgca
gaccattcagtgcgagtctgggatctcaagaaagctactacagaatcaggtcccgaacca
gagcaagcattcgttggttatttgggcgatgttacaggttctatcaatcaagacattaaa
gaatatggtagaaggagaaccgttataccaactaatgatcttgtagcttcgttctacaca
aagaagactccagtgtttaaagttaagtttacaagaagtaatctggcactagcgggtggt
gcatatagagattga

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