Zygosaccharomyces rouxii: ZYRO0B06248g
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Entry
ZYRO0B06248g CDS
T01118
Name
(RefSeq) replication factor C subunit 4
KO
K10755
replication factor C subunit 2/4
Organism
zro
Zygosaccharomyces rouxii
Pathway
zro03030
DNA replication
zro03410
Base excision repair
zro03420
Nucleotide excision repair
zro03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
zro00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ZYRO0B06248g
03410 Base excision repair
ZYRO0B06248g
03420 Nucleotide excision repair
ZYRO0B06248g
03430 Mismatch repair
ZYRO0B06248g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
zro03032
]
ZYRO0B06248g
03036 Chromosome and associated proteins [BR:
zro03036
]
ZYRO0B06248g
03400 DNA repair and recombination proteins [BR:
zro03400
]
ZYRO0B06248g
DNA replication proteins [BR:
zro03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
ZYRO0B06248g
DNA Replication Termination Factors
ELG1-RFC complex
ZYRO0B06248g
Chromosome and associated proteins [BR:
zro03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
ZYRO0B06248g
DNA repair and recombination proteins [BR:
zro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
ZYRO0B06248g
Check point factors
HRAD17(Rad24)-RFC complex
ZYRO0B06248g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_14
AAA_22
AAA_16
nSTAND3
AAA_3
Viral_helicase1
Rad17
RCF1-5-like_lid
RuvB_N
Mg_chelatase
AAA_assoc_2
DNAX_ATPase_lid
MeaB
AAA_19
AAA_24
NTPase_1
ATPase_2
NPHP3_N
KTI12
Motif
Other DBs
NCBI-GeneID:
8202371
NCBI-ProteinID:
XP_002495224
UniProt:
C5DR80
LinkDB
All DBs
Position
B:502255..503220
Genome browser
AA seq
321 aa
AA seq
DB search
MSKPPLTLELPWVEKYRPKQLSDTVGNEETIHRLQQIAKDGNMPHLIISGLPGIGKTTSI
HCLAHELLGDSYSQGVLELNASDDRGIDVVRNQIKQFAQKKCHLEPGKHKIIILDEADSM
TAGAQQALRRTMELYSNTTRFAFACNQSNKIIEPLQSRCAILRYSKLSDEQVLKRLLEII
KAENVQYTNDGLEALIFTAEGDMRQAVNNLQSTVAGHSLVSGENVFKIVDSPHPLVVKKM
LLAPTLDESIALFKNELWDKGYSSVDIVTTCFRVTKTLYQLKEAKRLEMIKEIGIAHMRI
LEGVGTYLQLACLLAKIHQLK
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaacctccacttacattagaactaccctgggtggaaaaatatcgtcccaagcag
ctgagcgataccgttggtaatgaagagactatccacagattacaacaaatcgctaaggat
ggtaatatgccacatctgatcatatcaggattaccgggtattggtaaaacaacatctatc
cattgtttagcacatgaactattaggcgattcatattctcagggagtgctagagttaaat
gcatccgacgatagaggtatcgatgtcgtgagaaaccaaatcaagcaattcgcccaaaag
aaatgccatttggaacctggcaagcataaaattatcatattggatgaagcagattctatg
acggcaggtgctcaacaggcacttagaagaacaatggaattgtattccaatactacgagg
tttgcattcgcatgtaatcaatccaataaaattatcgaaccattacagagtagatgcgct
attttacgttattccaaattatctgatgaacaagttttaaagaggttgctagagattatc
aaggccgaaaatgttcaatatacaaatgatggattagaagctcttatttttacagcagag
ggtgatatgagacaagcagttaacaatttacaaagtaccgtggcaggtcatagtctagta
agtggtgagaatgtgtttaaaattgtcgattcgcctcacccgttagtggtaaagaaaatg
ctactggcacctacacttgacgaatccatcgctctattcaagaatgaactttgggacaag
ggttattcttctgtggatatcgttaccacttgtttccgtgttacgaagactttataccaa
ttgaaagaggctaaaagattagaaatgatcaaagaaatcggtatagctcacatgagaatt
cttgaaggtgtaggcacttatttacaacttgcatgcctactggccaaaatccatcaacta
aaatag
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