Zygosaccharomyces rouxii: ZYRO0B07062g
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Entry
ZYRO0B07062g CDS
T01118
Name
(RefSeq) CCR4-NOT core subunit CAF40
KO
K12606
CCR4-NOT transcription complex subunit 9
Organism
zro
Zygosaccharomyces rouxii
Pathway
zro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ZYRO0B07062g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zro03019
]
ZYRO0B07062g
Messenger RNA biogenesis [BR:
zro03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
ZYRO0B07062g
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rcd1
ARM_PUB
Motif
Other DBs
NCBI-GeneID:
8202407
NCBI-ProteinID:
XP_002495256
UniProt:
C5DRB2
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All DBs
Position
B:complement(555842..556837)
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AA seq
331 aa
AA seq
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MFQPYNNMQVPMPMMPGHQVPHGVPMGVMPMLQQQQQQQQAPQPQPQPQPQQLEHGVHAL
DDPNVYHWICQLTYGPQKEQALLELGRKREQFDDLAVVLWSSFGVMTSLLDEIISVYPML
QPQLLSNQLSNRVCNALVLLQCVASHSETKHLFLQAHIPLFLFPFLNTTSRQRTFEYLRL
TSLGVIGALVKNDSQEVINFLLRTDIIPLCLRIMKSSSELSKTVAIFILQKILLDDVGLQ
YICATLERFYAVTNVLRDMVDQLTIHTPPGRLLKHIIRCYLRLSDNLEARRLLKVALPAK
LRDNTFTDVLRDDVGSKRCLAQLLLTLNEEA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaaccgtataataatatgcaagtgcctatgcccatgatgcctgggcatcaggta
ccacatggcgttcctatgggagttatgcctatgttacaacaacaacagcagcaacaacaa
gcaccacaaccacaaccacaaccacaaccacaacaattggaacatggcgtacatgcatta
gatgacccgaatgtttatcattggatatgtcaattaacctatggacctcagaaggaacag
gcgctgttagaattaggtaggaaaagagaacaatttgatgatttggcagttgtgctttgg
tcatcattcggtgtaatgacttcattactagatgaaattatttcggtttaccctatgtta
caacctcagctgctgtcaaatcaattgtccaatcgtgtttgtaatgcattagtactttta
caatgcgttgcatctcattcagagactaaacatcttttcctacaagcgcatatcccatta
tttttatttccatttctaaacacgacatcaagacagagaacctttgaatatttaagatta
acatcactaggtgtaattggtgctttggttaagaatgattcccaagaagttataaatttt
ctactacgaactgatattattccattgtgtttacgtataatgaaatcatcgtctgaatta
tccaaaaccgtggcaattttcatcttacaaaaaattttgttggacgacgttggactacaa
tacatttgtgcaactttagagaggttttatgccgtaacaaatgttttaagagatatggtc
gatcaattaacaatacatacaccacctggtagactgctaaaacatatcattagatgttac
ttgagattgagtgataatttagaagcaagaagattattaaaagtagcattaccagcaaaa
ttaagagataacacctttacagatgttttgagggacgatgtagggtcaaaaagatgtttg
gctcagttgttactgacgttaaacgaggaagcataa
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