Zygosaccharomyces rouxii: ZYRO0B11836g
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Entry
ZYRO0B11836g CDS
T01118
Name
(RefSeq) TFIIH/NER complex ATP-dependent 5'-3' DNA helicase subunit RAD3
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
zro
Zygosaccharomyces rouxii
Pathway
zro03022
Basal transcription factors
zro03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
zro00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
ZYRO0B11836g
09124 Replication and repair
03420 Nucleotide excision repair
ZYRO0B11836g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zro03021
]
ZYRO0B11836g
03036 Chromosome and associated proteins [BR:
zro03036
]
ZYRO0B11836g
03400 DNA repair and recombination proteins [BR:
zro03400
]
ZYRO0B11836g
Enzymes [BR:
zro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
ZYRO0B11836g
Transcription machinery [BR:
zro03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
ZYRO0B11836g
Chromosome and associated proteins [BR:
zro03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
ZYRO0B11836g
DNA repair and recombination proteins [BR:
zro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
ZYRO0B11836g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD_2
HBB
Helicase_C_2
ResIII
DUF5667
DUF6165
Motif
Other DBs
NCBI-GeneID:
8202618
NCBI-ProteinID:
XP_002495457
UniProt:
C5DRW3
LinkDB
All DBs
Position
B:940987..943299
Genome browser
AA seq
770 aa
AA seq
DB search
MKFFIDDLPVLFPYPKIYPEQYHYMCDLKRTLDSGGNSILEMPSGTGKTVSLLSLTIAYQ
MHYPEHRKIIYCSRTMSEIEKALVELENLMDYRTKELGYREDFRGLGLTSRKNLCLHPQV
SKERNGTLVDEKCRRMTNGQAKHKQEADPDAKVELCDYHENLYNYQVEDYLPKGVFSFEK
LIRYCEERTLCPYFIVRRMISLCNIIIYSYHYLLDPKIAERVSNEVSKDGIVIFDEAHNI
DNVCIESLSLDLTNDVLKRATKGAYALENRIDEVRQVDARRLQDEYDKLVQDLHAADILD
QEEEPAVETPVLSQDLITEAMPGNIRRAEHFVSFLKRLIEYLKTRMKVLHVISETPKSFL
QHLKQLTFIDRKPLRFCAERLSLLVRTLEVTEIEDFTALKDIATFATLISTYESGFLLII
EPYEIENAAVPNPIMRFTCLDASIAIKPVFERFSSVIITSGTISPLDMYPRMLNFDTVLQ
KSYAMTLAKKSFLPMIVTKGSDQVAISSRFEIRNDPSIVRNYGSMLVEFAKITPDGMVVF
FPSYLYMESIISMWQTMGILDEVWKYKLILVETPDAQETSLALETYRKACSNGRGAIILS
VARGKVSEGIDFDHHYGRTVLMIGIPFQYTESRILKARLEFLRENYQIRENDFLSFDAMR
HAAQCLGRVLRGKDDYGVMILADRRFSRKRNQLPKWISQGLSDADLNLSTDMAIANAKQF
LRTMAQSTDPKDQEGVSVWRHEELIKYQQEKQGAPNNGTDLMHMEVDVEG
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgaagttctttatcgatgatttgccggttctgtttccctaccccaaaatctatccagaa
cagtatcactatatgtgtgatcttaagagaactttggatagtggaggtaatagcatttta
gaaatgccttcaggtactggtaagactgtctccctgttgtcgttgacgatagcataccaa
atgcactatccagaacatagaaagattatctattgttcacgtaccatgtcagagattgaa
aaggcactagtagaattggaaaatttaatggattatagaacaaaggagttaggttatcgt
gaagatttccgggggcttggattaacatctagaaagaatttatgtctgcatcctcaagtc
agtaaggaaagaaatggtactctggtggatgaaaaatgtcgccgtatgactaacggtcaa
gctaagcataaacaagaagcagaccctgatgcaaaagtggaactttgtgactaccatgaa
aatctttacaactatcaggtggaagattatttacccaagggcgttttctcatttgagaag
ctcataaggtattgtgaagagagaactctatgtccctattttatcgttcgtagaatgatc
tccctctgcaatattattatttattcgtaccattatcttttagatccaaagattgctgaa
agagtctctaatgaggtatccaaagatggtatcgtcatctttgatgaagcgcataatatc
gataacgtttgcattgaatcattatcgcttgatttaactaatgatgttttgaaaagggct
acgaagggtgcatatgcattggaaaatagaattgacgaggttagacaagtagatgctcga
aggttacaggatgaatacgataaattggttcaggatttacatgccgctgatatattagac
caagaggaggagcctgcagtggaaactccggttttatctcaagatttaattactgaagct
atgcctggtaacattagaagagcagaacatttcgtatcatttttgaaaagactgatagaa
tacttaaagacaagaatgaaggtcttgcacgtcatttcagaaacacctaaatcatttttg
caacatttaaaacaactgacattcatcgatcgaaaacctctaagattctgtgccgagcgt
ctatcgcttttggtaagaaccctagaagttaccgaaatcgaagatttcaccgctttgaag
gatattgctacttttgcaacactgatatctacttatgaaagtgggttcttgttgatcatt
gaaccttatgagattgaaaatgctgcggtacctaatccaatcatgagatttacctgtctc
gatgcttccatagctataaaacctgtttttgaaagattttcatcagtaattatcacatct
ggtaccatttcaccattagacatgtatccaaggatgttaaattttgatacggtgttacaa
aagtcatatgcaatgacattggcaaagaaatcatttttgcccatgatagtaacaaagggg
tctgatcaggttgccatctcttcaagatttgaaattagaaacgatccaagtattgttcgt
aattatggttctatgcttgtggaatttgcaaaaattactcctgatggtatggtggtattc
ttcccctcatatttatatatggaaagcattatctccatgtggcaaactatgggtatattg
gatgaggtctggaaatataaactaattcttgtagaaactcctgatgctcaagagacttcg
ttggctttagagacttatagaaaagcttgctcgaatggtagaggtgcgataatcctatct
gttgctcgtggtaaagtttcagaaggtatcgattttgatcatcactacggtagaactgtg
ctgatgattggtattccattccaatacacggaatcccgtattttgaaagctaggctggag
tttttaagagaaaactatcaaattagggagaatgattttctatcctttgacgcaatgcgt
catgcagcccagtgtctaggtagagtcttaagaggtaaagacgattacggggttatgatt
ttagcagatcgtaggttttcaagaaaaagaaatcaattgccaaaatggatttcacaaggt
ttgtcagatgctgacttaaatctttccaccgatatggcaatcgccaacgccaaacaattt
ttgagaactatggctcaatcaacagatccaaaggatcaagaaggtgtctctgtttggagg
catgaggaattgattaagtaccagcaagaaaaacagggcgcccctaataatggtacagat
ttaatgcatatggaagtggacgttgagggttag
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