Zygosaccharomyces rouxii: ZYRO0C04400g
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Entry
ZYRO0C04400g CDS
T01118
Name
(RefSeq) RNA-processing protein REF2
KO
K15543
RNA end formation protein 2
Organism
zro
Zygosaccharomyces rouxii
Pathway
zro03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zro00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
ZYRO0C04400g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zro03019
]
ZYRO0C04400g
Messenger RNA biogenesis [BR:
zro03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
ZYRO0C04400g
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Motif
Pfam:
DUF3038
Motif
Other DBs
NCBI-GeneID:
8203044
NCBI-ProteinID:
XP_002495849
UniProt:
C5DT05
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Position
C:345123..346553
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AA seq
476 aa
AA seq
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MSNPIPQLVNISHALQSDTVEKIRRDIKEFHEASQLKPEQVEAINHYISSLKSTFGRFTE
DNEHVERQDAGVTSADTQLYSGLKSMYMDYLNQLGSIKREKVLGDEEVSKDKPVDYISEE
LPYLQPTERKEYIEGLMLNDSTSKNMGKSQGFLDGMINLCVLDSTVTENLRCYVTLLRKV
GYTKEELKNLLPKGLALMPSLTPNNAEEKAKEASASKKVPSSMESAPSFSGVTTHPDSTG
SSTGTNTTGGGDDEPKKKISFSRYLKKGDGNENGKRKASLMEEDLRPVKKARANGGSELR
SILRTTGSSSSSSKKSGNNIKFVDDSYLVTVFGDGLPNDGLQLSPERLKKVLKPFKEGEP
REIVHVVEFKDKAAELDIEFDLSPEESDITETKGGPIPCETTAPLKHRLNFANFSPDLGN
KPIREAVVVEDSTVKGKGPLIAKAFGKNSLLLRKDRGGLPYKRIPDVTPNDYPPRP
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atgtctaatccgatacctcagttggtaaacatatcgcatgcattacaatcagatactgtg
gagaagatacgtcgtgacattaaggaattccatgaagcatcacaattgaagcccgagcaa
gtggaggctattaaccactatatttcttctttgaaatcaacgtttggacggttcaccgag
gataacgaacatgtggaaagacaagatgcaggcgttacttctgccgacactcagctatat
tcaggattgaaatcgatgtacatggattatttaaatcaattagggtccatcaagagggaa
aaagtactgggtgatgaagaagtgagtaaagataaaccagtagattatatatctgaagaa
ctaccgtatctacaacccacagaaagaaaagaatacattgaaggattaatgctgaatgat
tccaccagcaaaaatatgggtaaatctcagggatttttagacgggatgatcaatttatgt
gtgttagattccaccgtgacagaaaatctacgatgttacgttactttgctgcgaaaagtt
ggatacacaaaggaagaattgaaaaatctattgcccaagggtttagctctaatgccatca
ttaacacctaataatgctgaagaaaaggcaaaggaggccagtgcttcgaagaaagttcca
agcagtatggagagtgcaccatcattcagtggagttaccactcatcctgattctacagga
tcttcaactggtaccaacactactgggggtggtgatgatgaacctaagaaaaagatttca
ttttctagatatttgaagaaaggtgacggtaatgaaaacggcaaaaggaaggcttcccta
atggaggaagacctgcgtcctgtaaaaaaagcaagagcaaacggtggtagtgaattacga
tctatcttgaggacaactggtagcagtagtagtagcagtaaaaaatcaggtaataatatt
aagtttgtcgacgattcttacctagttacggttttcggtgatggtttacctaatgatggt
ttgcagttatcgccagaaagattaaagaaagtgctgaaacctttcaaagaaggtgagcca
agggaaattgtacatgtggtagaatttaaagataaggcagctgaactagacatcgaattt
gatttatcgcctgaagaatcagatattacagagactaagggcggtccaataccttgtgaa
acgacagctccattaaaacataggctaaattttgcaaattttagtccagatttgggtaat
aaaccaattagagaagctgtagtggtagaagattcgactgttaaggggaagggcccactg
atagcgaaagcgtttggtaagaatagcttactattgagaaaggatagaggcggattgccc
tacaaacgaattccagatgtgacacctaatgattatccacctagaccatga
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