KEGG   Zygosaccharomyces rouxii: ZYRO0C04400g
Entry
ZYRO0C04400g      CDS       T01118                                 
Name
(RefSeq) RNA-processing protein REF2
  KO
K15543  RNA end formation protein 2
Organism
zro  Zygosaccharomyces rouxii
Pathway
zro03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:zro00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    ZYRO0C04400g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zro03019]
    ZYRO0C04400g
Messenger RNA biogenesis [BR:zro03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     ZYRO0C04400g
SSDB
Motif
Pfam: DUF3038
Other DBs
NCBI-GeneID: 8203044
NCBI-ProteinID: XP_002495849
UniProt: C5DT05
LinkDB
Position
C:345123..346553
AA seq 476 aa
MSNPIPQLVNISHALQSDTVEKIRRDIKEFHEASQLKPEQVEAINHYISSLKSTFGRFTE
DNEHVERQDAGVTSADTQLYSGLKSMYMDYLNQLGSIKREKVLGDEEVSKDKPVDYISEE
LPYLQPTERKEYIEGLMLNDSTSKNMGKSQGFLDGMINLCVLDSTVTENLRCYVTLLRKV
GYTKEELKNLLPKGLALMPSLTPNNAEEKAKEASASKKVPSSMESAPSFSGVTTHPDSTG
SSTGTNTTGGGDDEPKKKISFSRYLKKGDGNENGKRKASLMEEDLRPVKKARANGGSELR
SILRTTGSSSSSSKKSGNNIKFVDDSYLVTVFGDGLPNDGLQLSPERLKKVLKPFKEGEP
REIVHVVEFKDKAAELDIEFDLSPEESDITETKGGPIPCETTAPLKHRLNFANFSPDLGN
KPIREAVVVEDSTVKGKGPLIAKAFGKNSLLLRKDRGGLPYKRIPDVTPNDYPPRP
NT seq 1431 nt   +upstreamnt  +downstreamnt
atgtctaatccgatacctcagttggtaaacatatcgcatgcattacaatcagatactgtg
gagaagatacgtcgtgacattaaggaattccatgaagcatcacaattgaagcccgagcaa
gtggaggctattaaccactatatttcttctttgaaatcaacgtttggacggttcaccgag
gataacgaacatgtggaaagacaagatgcaggcgttacttctgccgacactcagctatat
tcaggattgaaatcgatgtacatggattatttaaatcaattagggtccatcaagagggaa
aaagtactgggtgatgaagaagtgagtaaagataaaccagtagattatatatctgaagaa
ctaccgtatctacaacccacagaaagaaaagaatacattgaaggattaatgctgaatgat
tccaccagcaaaaatatgggtaaatctcagggatttttagacgggatgatcaatttatgt
gtgttagattccaccgtgacagaaaatctacgatgttacgttactttgctgcgaaaagtt
ggatacacaaaggaagaattgaaaaatctattgcccaagggtttagctctaatgccatca
ttaacacctaataatgctgaagaaaaggcaaaggaggccagtgcttcgaagaaagttcca
agcagtatggagagtgcaccatcattcagtggagttaccactcatcctgattctacagga
tcttcaactggtaccaacactactgggggtggtgatgatgaacctaagaaaaagatttca
ttttctagatatttgaagaaaggtgacggtaatgaaaacggcaaaaggaaggcttcccta
atggaggaagacctgcgtcctgtaaaaaaagcaagagcaaacggtggtagtgaattacga
tctatcttgaggacaactggtagcagtagtagtagcagtaaaaaatcaggtaataatatt
aagtttgtcgacgattcttacctagttacggttttcggtgatggtttacctaatgatggt
ttgcagttatcgccagaaagattaaagaaagtgctgaaacctttcaaagaaggtgagcca
agggaaattgtacatgtggtagaatttaaagataaggcagctgaactagacatcgaattt
gatttatcgcctgaagaatcagatattacagagactaagggcggtccaataccttgtgaa
acgacagctccattaaaacataggctaaattttgcaaattttagtccagatttgggtaat
aaaccaattagagaagctgtagtggtagaagattcgactgttaaggggaagggcccactg
atagcgaaagcgtttggtaagaatagcttactattgagaaaggatagaggcggattgccc
tacaaacgaattccagatgtgacacctaatgattatccacctagaccatga

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