Zygosaccharomyces rouxii: ZYRO0C08360g
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Entry
ZYRO0C08360g CDS
T01118
Name
(RefSeq) CCR4-NOT core ubiquitin-protein ligase subunit MOT2
KO
K10643
CCR4-NOT transcription complex subunit 4 [EC:
2.3.2.27
]
Organism
zro
Zygosaccharomyces rouxii
Pathway
zro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ZYRO0C08360g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
zro03000
]
ZYRO0C08360g
03019 Messenger RNA biogenesis [BR:
zro03019
]
ZYRO0C08360g
04121 Ubiquitin system [BR:
zro04121
]
ZYRO0C08360g
Enzymes [BR:
zro01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
ZYRO0C08360g
Transcription factors [BR:
zro03000
]
Eukaryotic type
Zinc finger
Cys3His zinc factors
ZYRO0C08360g
Messenger RNA biogenesis [BR:
zro03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
ZYRO0C08360g
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
ZYRO0C08360g
Ubiquitin system [BR:
zro04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
ZYRO0C08360g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_4
Baculo_IE-1
RRM_1
Rtf2
zf-RING_2
VPS13_N
SET_assoc
DUF6591
zf-C3HC4_3
zf-C3HC4
Prok-RING_4
zf-RING_UBOX
zf-UDP
Beta-prop_WDR11_1st
SLC52_ribofla_tr
Motif
Other DBs
NCBI-GeneID:
8203219
NCBI-ProteinID:
XP_002496009
UniProt:
C5DTG5
LinkDB
All DBs
Position
C:637103..639058
Genome browser
AA seq
651 aa
AA seq
DB search
MALNPHVHENLKAIQRALSNYDMSFLSDDEEDFCPLCLEPMDITDKNFKPCPCGYQICQF
CYNNIRQNEELNGRCPACRRKYDDDSVEYVVLTVEELRMEREKQTRKEWERKQREKERKE
SEYANRKHLAGMRVIQKNLVYVVGVNPPVPYEEVAGVLKSDKYFGQYGKISKIVVNRKTP
VGSNNDHYHSNTSNNSSSATNASGNANGPSGTVPGYGVYITFAKKEDAARCIAQVDGTYM
DGRLVKAAYGTTKYCSSYLRGLPCPNPNCMFLHEPGEEADSFNRKELSNKPTTQRNTQSN
GPIYRSGGAGGHFSGTSSPAAVKVQLHHDHHSNGSSTPILTPAPVPTGSNPWGVSNNTAQ
LNSISLSKNGSAHNLPTLGETLSQQQQQQQQQQQQQQQQQQQQQQQQQQHGISNESSNNH
SKKKQQDKSNGKDYADPYDALGSAVAFLDERINWFSNYQNHEFHLQTNLVDDETYGHYPS
LFSWENLDTSEQSDQTLTRKLVDILAINPVDYSASVISFLQNASASTNLTSNASNTPVAA
AAAAAAAANTTPATTTTPLPQQIHLHQQVPPPAAAAAAAAAAAGGPAQHQQHPLNVNTPP
PPGIFTPHQMALHQQQQQQQQQPMAAETAATPNSADFLNQLINGRRVAAGN
NT seq
1956 nt
NT seq
+upstream
nt +downstream
nt
atggcactaaatccgcatgttcacgagaacctaaaggccattcaaagggctttaagcaac
tatgatatgtcatttttaagtgatgatgaggaggatttttgtccactttgtcttgaacct
atggatattactgacaagaacttcaaaccctgtccctgtggatatcaaatctgccagttt
tgctataacaatatcagacaaaatgaagaattaaatggtagatgtcctgcatgtcgtcgt
aaatatgacgatgacagcgttgaatacgttgtattgacagtggaagaattaaggatggaa
agagaaaagcagacacgtaaggaatgggaaaggaaacaacgtgaaaaggaacgcaaggaa
agtgagtacgctaatagaaagcacttggcaggaatgcgtgtaattcaaaaaaatctggtc
tatgtggttggtgttaaccctccagtgccatatgaggaagtcgctggtgtactaaaatca
gacaaatattttggtcaatacggtaagatcagtaagattgttgttaataggaagactcct
gttggtagtaataatgatcattaccattctaatactagcaataatagcagtagtgcaacc
aatgcaagtggtaatgccaatggtcctagtggtaccgttcctggttatggtgtttacatt
acatttgccaaaaaggaagatgcagcacgctgtattgctcaagttgatggtacctatatg
gatggcagattggtaaaagccgcctatggtacgacgaagtattgttcatcatatttacgt
ggattaccatgtccaaatccaaactgtatgtttcttcatgaacctggtgaagaagcggat
tcatttaaccgtaaagaattgagtaataaaccaactacacaacgtaatactcaaagtaat
gggccaatttacagaagtggtggcgctggtggtcatttctcaggtacttcttcacctgca
gctgttaaagtccagcttcatcatgatcatcacagcaatggtagttcaactccaatttta
acacctgcgcctgtacccacaggttcaaatccctggggggtttctaacaatacggcacaa
cttaactcaattagtctttcgaaaaatggtagtgcacataatttaccaacattgggtgaa
actttaagccaacagcaacaacaacaacaacaacaacagcagcaacaacaacagcaacaa
caacaacagcagcaacaacaacaacaacatggaattagcaatgaaagctctaataaccat
agtaagaagaaacaacaagataaatctaacggtaaggattacgctgatccatatgatgcg
ctaggtagtgcggttgccttcttagatgaaagaattaattggttctccaattaccaaaat
catgaattccatttacaaactaatttagtggatgatgaaacttatggtcattatccatct
ttgttttcctgggaaaacttagacacttccgaacaaagtgatcaaactttgacaagaaaa
ttggtggacatccttgcaattaatcctgtggattattctgcatctgtgatttcattttta
caaaatgcaagtgcaagtacaaatttaacatcaaatgcaagcaataccccagttgctgct
gccgcagcagcagcagcagcggctaacactacccctgcaactaccactacaccactacct
caacagattcatctacatcaacaagtaccacccccagcggcggcagcagcagcggcggca
gcagcagcaggaggaccagcacaacatcaacaacatcccctaaatgttaatacgccacca
ccaccaggtatttttacaccccaccaaatggctctgcatcaacaacaacaacagcagcaa
caacaacctatggccgctgaaactgctgcaactccaaattcagctgattttctcaatcag
ttgattaacggtagaagagtcgctgcaggaaactaa
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