Zygosaccharomyces rouxii: ZYRO0C16016g
Help
Entry
ZYRO0C16016g CDS
T01118
Name
(RefSeq) TFIIH/NER complex subunit TFB4
KO
K03143
transcription initiation factor TFIIH subunit 3
Organism
zro
Zygosaccharomyces rouxii
Pathway
zro03022
Basal transcription factors
zro03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
zro00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
ZYRO0C16016g
09124 Replication and repair
03420 Nucleotide excision repair
ZYRO0C16016g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zro03021
]
ZYRO0C16016g
03400 DNA repair and recombination proteins [BR:
zro03400
]
ZYRO0C16016g
Transcription machinery [BR:
zro03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
ZYRO0C16016g
DNA repair and recombination proteins [BR:
zro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
ZYRO0C16016g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb4
DUF7385
MIC19_MIC25
Motif
Other DBs
NCBI-GeneID:
8203564
NCBI-ProteinID:
XP_002496335
UniProt:
C5DUE1
LinkDB
All DBs
Position
C:1256628..1257656
Genome browser
AA seq
342 aa
AA seq
DB search
MNFFEPFKQISEKSADDKKPIMDAISDPTFQPTKPRSHLAEETPSLLTVIVDTAPRLWAE
LDNERNQTGKIIDMLKSLLVFLNAHLAFNSSNQVAVIAAHSQGIKYLYPKSSSNQSNSLK
GKDLSIINNDMYRQFRNVDETLVEELYGLFQQEKEQADEVTQKSTLAGAMSAGLTYVNRV
SKELETISFKSRLLVVTCGSGGGRDEIFQYIPIMNCIFSATKLKCPIDVVKIGGSKESTF
LQQTTDATQGVYLHAESTEGLIQYLATAMFIDPSLRQIIVKPNQGSVDFRTSCYLTGKVV
AIGYICSVCLCVLSVSPPGNRCPACDSEFDERVISKFKRIKK
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaacttcttcgaaccttttaaacagataagtgaaaagtctgcagatgataaaaagcct
atcatggatgccatttctgaccctacatttcaaccgactaaaccccgttcacatttagct
gaagaaacaccgtctctgttgacggtcattgtagatacagctccaagactttgggcggaa
ctggacaatgagagaaatcaaactggtaagataatcgatatgttaaaatcgctattagta
tttctaaatgcacacttggctttcaatagctctaatcaagtggcagtcattgcggcacat
tctcaaggaatcaaatatttatatccaaagagtagttccaatcaaagcaactctctcaaa
ggtaaggatctttcgattatcaacaatgacatgtaccgacagttcagaaatgtagacgaa
acgctggtcgaggaattatatggccttttccagcaggagaaagaacaagctgatgaagtt
acacaaaagagtactttagcaggcgctatgtctgcaggattaacatatgtgaatagagtt
tcgaaagaattagagacaatttcattcaaatcaagactactggtggttacatgtggtagt
ggtggtggtagagatgaaatctttcaatatattcccattatgaactgtatcttctcagct
actaaattgaaatgtcccatagatgtcgtaaagattggtggtagcaaagagagtacattt
ctacaacagactacagatgctactcagggtgtatacttacatgcggaatcaacagaggga
ctcatacagtatttggccactgcgatgttcattgatccatccttaagacaaattattgtt
aaaccaaaccaagggtctgtggattttagaacctcatgttatcttactggtaaagtggtg
gccattggttacatctgttcagtgtgtctatgtgttctatcagtgagtccaccaggtaat
agatgcccagcatgcgattctgaattcgatgaaagggtaatatcgaagtttaagagaatc
aaaaaatga
DBGET
integrated database retrieval system
