Zygosaccharomyces rouxii: ZYRO0C16588g
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Entry
ZYRO0C16588g CDS
T01118
Name
(RefSeq) CCR4-NOT core subunit NOT5
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
zro
Zygosaccharomyces rouxii
Pathway
zro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
zro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ZYRO0C16588g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zro03019
]
ZYRO0C16588g
Messenger RNA biogenesis [BR:
zro03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
ZYRO0C16588g
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
ZYRO0C16588g
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Not3
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
8203590
NCBI-ProteinID:
XP_002496360
UniProt:
C5DUG6
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Position
C:1293001..1294827
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AA seq
608 aa
AA seq
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MSQRKLQQDIDKLLKKVKEGFMDFEEVYDKFQSTDPENTSYREKLESDLKREIKKLQKHR
DQIKTWLSKEDVKDKQGVLLENRKMIENGMERFKSVEKLMKTKQFSTEALTNPDIIKDPR
ELKKRDQLLFVQDCLEELQKQLESHEALEEQEKIERHEFHIHNLENILKLLQNNELEPDV
VQEYQDDVKYYVENNDDPDFIEYDTIYEDMGCEIKPNQENTNSKDVTSSSPPPDSSNAKE
SSNAATIATTAAAAGAASIPSSGVSSSINGTPHGSKTLKKQEKSPKKKTQTGTGTAVSTT
GTPSRVASASLAQASPTPETVTLAQTNSNTKPESSNNSNTNTNLVTNKKKEIAQPPLELQ
PPKDRSREIEDQIRRDLGEQDAFKNELFSGELKYWLRSKRPLMQPYEEMPEKMLSQLESS
LLNCPDSLDADSPHFYRKPLSLPHPTSIFFPNEPIRFVCPADVSPPPPTQTTTTSVIQHQ
QQQRQHSSSQEQIDNGADEKDEAEDIYSRTSLARILRKFDLDTLFFIFYHYQGTYEQFLA
ARELAKNRKWKFNKVDRCWYYKEVEKLPPGMAQSEEESWRYFDYQRSWLARRCNSDFIQN
EENFEKIL
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcagaggaaattgcaacaagatatcgataaactgctgaagaaagttaaggaaggt
tttatggactttgaagaagtctacgataaattccaatccacagatcctgaaaatacttcg
tatagggaaaaactggaatctgacttgaaaagggagatcaagaaattgcagaagcataga
gatcaaattaagacgtggctcagtaaagaagacgtaaaagataagcaaggtgttctatta
gagaatcgtaaaatgattgaaaatgggatggaaaggtttaaatctgttgaaaaactgatg
aaaacgaaacaattttccactgaagcgttgactaaccctgatatcatcaaggatcctcgt
gaattgaagaaaagagatcaattactatttgttcaagattgtttagaggagttacaaaag
caattagaaagtcatgaagctctagaggaacaagaaaaaattgaaagacatgaatttcat
attcataatctggaaaacattttgaaattacttcaaaataatgaattggaaccagatgtt
gtacaagaatatcaagatgatgtcaaatactatgtggaaaataacgatgatccagatttt
atcgagtatgacaccatatatgaagatatggggtgtgaaattaaacctaatcaagagaat
acgaacagcaaggatgtgacgtcaagttctccacctccagattcttcaaatgcgaaggaa
tcctctaatgctgccactatcgccacaacagcggcagcagcaggagctgcttctattcct
agcagtggtgtctcttcctccattaatggaacccctcatggatccaaaactttgaagaaa
caagaaaaatcaccaaagaagaaaacgcaaactggaacaggaacagctgtatctactacg
ggaacaccaagtcgtgtagcatctgcatcattggcccaagcctcacctacaccggaaacc
gtgacgctagctcagacgaattcgaatacaaagccagagtcaagtaataacagcaataca
aacacaaatctagtgacaaataagaagaaagagatagcgcaaccaccactggaattgcag
ccgccaaaggatagatcaagggaaatcgaagatcaaatacgccgtgatttaggtgagcaa
gatgcgtttaaaaacgaattgtttagtggagagttgaaatattggttacgatccaaaagg
ccacttatgcaaccatatgaggaaatgccagagaagatgctatcacaattagaatcgtca
ctattaaattgtcctgattcattagatgcggactctccacatttttacagaaaaccgtta
tcattaccgcatccaacttcaatatttttccccaatgaaccaataagatttgtatgccca
gctgatgtttctccaccgccaccaacgcaaacaacgacgacaagtgttatacaacaccaa
caacaacagcgacaacacagttcatcacaagaacaaattgataatggtgccgatgagaaa
gatgaagccgaagatatctattctcgaacatcgttagcacgcatactaaggaaatttgat
ctagatactttgttcttcatcttttatcattatcaaggtacttatgaacaatttttagcc
gcacgtgaactagcgaagaataggaaatggaagtttaacaaagtggaccgttgttggtat
tataaagaggtagaaaaattaccacctggaatggcacaaagtgaagaagaatcatggaga
tattttgattaccaaagaagttggttagcaagacgttgtaatagcgattttatccaaaat
gaggaaaacttcgaaaaaatcttgtaa
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