Zygosaccharomyces rouxii: ZYRO0C17116g
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Entry
ZYRO0C17116g CDS
T01118
Name
(RefSeq) transcription factor TFIIB
KO
K03124
transcription initiation factor TFIIB
Organism
zro
Zygosaccharomyces rouxii
Pathway
zro03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
zro00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
ZYRO0C17116g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zro03021
]
ZYRO0C17116g
Transcription machinery [BR:
zro03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
ZYRO0C17116g
Prokaryotic type
Archaeal type
TFB
ZYRO0C17116g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
DUF1456
Sigma70_r4
Motif
Other DBs
NCBI-GeneID:
8203614
NCBI-ProteinID:
XP_002496383
UniProt:
C5DUI9
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All DBs
Position
C:1329224..1330264
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AA seq
346 aa
AA seq
DB search
MSLSAVATIRERRGPNLNIVLTCPECKVYPPKIVERFSEGDCVCALCGLVLSDRLVDTRS
EWRTFSNDDQNGDDPSRVGEAANPLLDGNSLSTRIGQGEGGDARATRDLNRAQSKNVLDK
KDNEIQAIFIKITMLCDVAELPKIVKDSAKEIYKLCYDSRALKGKSMESVIAAAILLGCR
RAKVARTLTEVQSMIHVRRKEFSKSLKLMSSILMEKSADGIIKIDRGDMNGATNLSYIPR
FCSHLGLPMQLTTASEYTAGKCKEIEEIAGKSPITIAVVAIFFNVLLFKIPLTASRIAKV
LQVTEGTIKSGYRSLYEHRDQMVDPQLLKSGTVSLDNLEKLDKKRD
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgtctttatctgctgtggcaacgattcgtgagagaagaggacctaatctgaacatagtt
ttaacgtgtccagaatgcaaagtatatcctcccaagatagttgaaaggtttagtgaaggt
gattgcgtttgtgcgttatgtggacttgttctctcagataggttggttgacactagatct
gaatggcgtacattttccaatgatgatcagaacggcgatgaccccagtcgtgttggagag
gctgcaaacccattattagatggaaattcgctttcaacgagaattggacaaggtgaaggt
ggtgatgccagggccacaagggatttgaacagagctcaaagtaaaaatgtcttggataaa
aaggataatgaaatacaggctatttttatcaaaattaccatgttatgcgatgttgcagaa
ttacccaagattgtcaaggatagtgctaaggaaatttacaaattgtgctatgattctaga
gctctcaagggtaaatctatggaatcagtcatagcggcagctattttactgggttgcaga
cgtgccaaagtggcaagaactctaacagaggtacagtcgatgattcatgttaggagaaaa
gaattttctaaatcgctaaaactaatgagttcaattttgatggaaaaatctgccgatggt
atcattaagattgacaggggtgatatgaatggtgccaccaacttgtcttatataccaagg
ttttgctctcatttaggtctgccgatgcaactgacaactgcatcagaatacactgctggt
aagtgtaaagaaattgaagaaattgctggtaaaagtccaattaccattgctgttgttgca
atttttttcaacgtattactttttaaaataccattaacagcatcaagaattgcaaaggtt
ttacaggttacggaaggtacaattaaatcgggttacaggagtctttacgaacatagggat
caaatggttgatcctcagttgttgaaaagcggaaccgtttcgcttgataatttggaaaaa
ttggataagaaaagggattaa
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