KEGG   Zygosaccharomyces rouxii: ZYRO0D01122g
Entry
ZYRO0D01122g      CDS       T01118                                 
Name
(RefSeq) U4/U6-U5 snRNP complex subunit PRP4
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
zro  Zygosaccharomyces rouxii
Pathway
zro03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zro00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    ZYRO0D01122g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:zro03041]
    ZYRO0D01122g
Spliceosome [BR:zro03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    ZYRO0D01122g
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 EIF3I WDR55 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd ANAPC4_WD40 WD40_MABP1-WDR62_2nd Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_IFT140_1st WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_WDR19_1st NBCH_WD40 Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_HPS5 Beta-prop_WDR35_TULP_N Beta-prop_NUP159_NUP214 Beta-prop_SPT8 WD40_RFWD3 WD40_like Nbas_N Cytochrom_D1 PEP5_VPS11_N PRP4
Other DBs
NCBI-GeneID: 8203728
NCBI-ProteinID: XP_002496482
UniProt: C5DUT0
LinkDB
Position
D:complement(86927..88327)
AA seq 466 aa
MAAKSNTDSEDLQGKGADNGFAEDLKWLGFQRHEGLRLVPTIDEDVKGSLILLKEPESLA
GEDAFSRRERLAELIFKNKHYRDIFEASIYYKDGTDEQNMDEEDEVEEEEEEDFYTPASG
SLIDSRKFLIRYSLNKARERLMKESQRFQEFDMTQEIKKRRHFAMKTKNIELMGSQVVST
RPVSQVSLSPNGSLVAAASWAGDLTILNSQTLEILQNKPQIHMGKIGGIHWSPTGDLITA
GGEEGSVKLFGYKSNTLEEMATLNGHENRVTDSKFHPSGRFIASASFDMTWRLWDVETQE
ELLLQEGHGKELYSLGFQCDGSLVCSGGIDCKGLVWDIRSGKRAMSLSGHTKPIYSLDWS
PNGYQVATGSGDGTIRIWDLRKPEEYQTILAHKSIVTKVAFEKNGNCLVSSGYDKSINLY
GAYNWAQLTTLQGHMDKILCVDISENASSVVSCGWDRSVKLWTMQN
NT seq 1401 nt   +upstreamnt  +downstreamnt
atggcagccaagagtaatactgactctgaagatttgcaagggaagggtgcagataatgga
tttgctgaagatttgaaatggctaggcttccagagacatgaagggctaagactagtacct
acgatcgacgaagacgtcaaaggttctctaatattgttgaaagagccagaatccctagct
ggtgaagatgctttctcaagaagagagagattagccgagttgatattcaagaataagcac
tatagggacatctttgaagcatccatttactataaggacggcactgatgaacagaacatg
gatgaagaagatgaagttgaagaagaagaggaggaggatttttatacaccggctagcgga
tcactgattgattctaggaaatttctgatacgatattcattgaataaggccagggaaaga
ttaatgaaggagtcacagaggtttcaggagtttgatatgacccaagagattaagaaaagg
cgacattttgccatgaaaacgaagaatattgaacttatgggatctcaagtggtatcaact
agaccagtctcacaggtatccttgtctcccaatggttctcttgtggcagcggcaagctgg
gcaggtgatttaacaattctcaatagtcagacattagagatattgcaaaataaacctcaa
atccacatgggtaagattggtgggatccattggagtcccactggtgatttaatcactgca
ggtggtgaagaagggagtgtaaaactatttggctataaatctaatacattagaagaaatg
gcaacgttgaatggtcacgaaaatagggttactgactccaagttccatcctagcggaaga
tttattgctagcgcatctttcgatatgacctggagactttgggatgtagagacacaagag
gaattacttctgcaagagggacacggtaaagaattgtactcattagggtttcaatgcgat
ggttcgctggtctgtagtggaggaatcgattgtaaaggacttgtgtgggatataaggtcc
ggtaaacgtgcaatgtcgttatcaggacacactaaaccaatttatagcttagattggtcc
cccaatggatatcaagtggccacaggtagtggtgatggtactataagaatttgggattta
agaaaacctgaagaataccaaacaatattggctcacaagagtattgttaccaaagtcgca
ttcgagaaaaatggaaattgtctagtgtctagcggctacgacaagtcgatcaatttatat
ggtgcttacaactgggcccaattgacgactttacaaggtcatatggataagatactttgt
gttgatatatccgaaaatgcatcatcagtagtgagttgtggatgggatagatctgtcaaa
ctatggacaatgcaaaattaa

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