KEGG   Zygosaccharomyces rouxii: ZYRO0D03432g
Entry
ZYRO0D03432g      CDS       T01118                                 
Name
(RefSeq) uncharacterized protein
  KO
K12620  U6 snRNA-associated Sm-like protein LSm1
Organism
zro  Zygosaccharomyces rouxii
Pathway
zro03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:zro00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ZYRO0D03432g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zro03019]
    ZYRO0D03432g
Messenger RNA biogenesis [BR:zro03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     ZYRO0D03432g
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     ZYRO0D03432g
SSDB
Motif
Pfam: LSM DUF4426 DUF6532
Other DBs
NCBI-GeneID: 8203831
NCBI-ProteinID: XP_002496582
UniProt: C5DV30
LinkDB
Position
D:complement(285423..285980)
AA seq 185 aa
MVESNIEILQHQQSPFAPNVNVNTNAPVNTTQQHHHKKITEGEADLYLDQYNFTTTAAIV
GSVDRKVFVLLRDGKMLFGVLRTFDQYANLILEHCVERIYFTEKNKYAEEYRGLFMVRGE
NVVMLGEVDIDKEDQPLETMERIPFRDALKAKQIHDESRFKQETIKGKQLARYGILYDFH
KSDMY
NT seq 558 nt   +upstreamnt  +downstreamnt
atggtagagagtaacatcgaaattttacaacatcagcagagtccttttgctcctaatgtc
aatgtaaataccaatgctcctgtgaatacaacacaacaacatcatcacaagaaaatcact
gagggagaagctgatttataccttgatcagtacaattttaccacaactgcagctatcgta
ggttcagtagatcgtaaagtgtttgtgcttttacgtgatggtaagatgctattcggtgta
ctaagaacttttgatcaatacgccaatctcatactagaacattgtgtggaaaggatatac
tttactgaaaagaacaagtatgcagaggaatacagaggtctattcatggtacgtggtgaa
aatgtcgttatgttaggtgaagttgatatcgataaggaggatcaaccattggaaacgatg
gaacgtattcctttcagagatgccctaaaggcaaaacagatccacgatgagtcaagattt
aagcaagaaaccatcaagggcaaacaattggctcgctacggtatactttatgacttccat
aaatcggatatgtactag

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