Zygosaccharomyces rouxii: ZYRO0D04532g
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Entry
ZYRO0D04532g CDS
T01118
Name
(RefSeq) DNA-directed RNA polymerase I core subunit RPA190
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
zro
Zygosaccharomyces rouxii
Pathway
zro03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
zro00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ZYRO0D04532g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zro03021
]
ZYRO0D04532g
Enzymes [BR:
zro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ZYRO0D04532g
Transcription machinery [BR:
zro03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
ZYRO0D04532g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
Paf1
Motif
Other DBs
NCBI-GeneID:
8203881
NCBI-ProteinID:
XP_002496630
UniProt:
C5DV78
LinkDB
All DBs
Position
D:374177..379180
Genome browser
AA seq
1667 aa
AA seq
DB search
MDISKPVGSEISSVDFNVFSAEEIRNLSAKQITNPTVLDNLGHPISGGLYDLALGAFLRN
LCATCGLDEKFCPGHQGHIELPVPCYNPLFFSQLYIYLRSSCLYCHRFRLRSIEVNRFAC
KLRLLQYGLVEESYQLDQLRVGDLQGGSDDEDDNDEAVEDNNTSETPAKKSLKDASSAML
KELLQKRKEFVDVAIAKAISEGKASHKGVFTIITNEERKKVIHDFHRRLLSRAKCDNCGM
FSPKFRKDGFTKIFETALTDKQLTNNRVKGVIRQDMIKKQQQSAKLDGEEKANDVDEVFS
LGKNPSARPKTGSTYILSTEVRNIMRVLFKKEQEILQYVFHSRPNLLRKSVTPDVFFMEV
VLVPPTRFRLPSKLGEEVHENTQNQLLSKVLTTSLLIRDLNDEMSNLQKDKVSVEDRRVI
FSRLMNAFVTIQNDVNSFIDSTKAQGSTGGKVPIPGVKQALEKKEGLFRKHMMGKRVNHA
ARSVISPDPNIETNEIGVPPVFATKLTYPEPVTSYNIAELRQAVINGPDKWPGATQIQNE
DGSLVSLVGMTLEQRNALANQLLTPSSNPATHTLNKKVFRHIKNRDIVIMNRQPTLHKAS
MMGHKVRVLPGEKTLRLHYANTGAYNADFDGDEMNMHFPQNENARSEAFNLANTDSQYLT
PTSGSPLRGLIQDHISAGVWLTNKDSFFTRDQYQQYIYGCIRPEDGHSTRPKIVTVPPAV
MKPVPLWTGKQIITTVIMNVTPADMPGINLLSKNKIKNEYWGQGSTENEVIFKDGALLCG
ILDKSQYGASKYGIVHSLHEVYGPETAAKVLSVLGRLFTNFITNTAFSCGMDDLRLTAEG
NKDRKDLLKTSTDVGRQAAAEVTNLPTDTPSNDPELLKRLEEILRDDNKSGILDAVTSSK
VNSVTSKVVSTVIPKGTMKKFPQNSMQAMALSGAKGSTVNVSQIMCLLGQQALEGRRVPV
MVSGKTLPSFKPFETDSMAGGYIKGRFYSGIKPQEYYFHCMAGREGLIDTAVKTSRSGYL
QRCLTKQLEGIHVSYDNTVRDGDGTLVQFLYGGDAVDTTKESHMTQFDFCLENYDALLRK
YNPSALVEHLDVESALKYSKKALKSRKKIDKEPHYKNSDKYDPVLSKYNPAKYLGSVSEK
FQDKLEGFLDSHSKQLKLHSGINEKKFRALMQLKYMRSLVNPGEAVGIIAAQSVGEPSTQ
MTLNTFHFAGHGAANVTLGIPRMREIVMTASAAIKTPQMSLPVWNHVSDDQASIFCKSIT
KVVLSEVVDKVTVTETTGVSEHGSPARSYAVHMKFYGKDAYGEEYDVSKEELQNVVATKF
LYYLEMAIVKELKKQKKTSMPDIGVAVPKSQTALGSGEGPTSGSNEDNDEEEARQKTKQA
VSYEEPDEDEIETMRQAEKSSDEEGLDSDMDSGESDNESEKDEKDEEEDSIESAMTEANK
NMSKSQRDRQHAVISEHKFITKYNFDDEDGQWCNFKLELSGDTEKLLMVNIVEDICRKSV
IREVPHISRCIPGEPVGDRRMLTTEGVNFQAMWDQEMFIDVDGIRSNDVAAVLRTYGVEA
ARNTIVYEINNVFSRYAISVSFRHLDLIADLMTRQGNYLAFNRQGMETSTSSFMKMSYET
TCQFLTKAVLDNDREKLQSPSARIVLGKLNNVGTGAFDVLTKIPNSV
NT seq
5004 nt
NT seq
+upstream
nt +downstream
nt
atggatatttccaagccagttgggtcagaaattagttctgtagactttaacgttttttcc
gctgaggaaattcgtaatctttcagcaaaacaaattacgaatccaacggttttagataac
ttaggtcatccaatttctggtggtctttatgacttagcacttggtgcatttttacgtaac
ctttgtgctacatgtggtttagacgaaaagttttgtccaggtcatcaaggtcatattgaa
ttaccggtaccttgttataatccgctttttttcagtcaactttacatttatctgagaagt
tcctgtctttattgtcatcgtttccgtctgagatctattgaagttaaccgatttgcatgt
aaattaagattgttgcaatatggtcttgtagaagaatcctaccaattagatcagttacgt
gtaggtgacttacagggtggtagcgatgatgaagatgataacgatgaagcagttgaggac
aataacacttctgaaacacctgctaaaaaatctttgaaagatgcttcttctgctatgcta
aaggaattattacaaaagcgtaaggaattcgtggacgttgcaattgccaaggcgatttct
gaaggtaaagctagtcataagggtgttttcaccattattaccaatgaggaacgtaagaag
gtgatacacgacttccatagaagattactcagtagagctaaatgtgataactgtggtatg
ttttcaccaaaatttagaaaagatggattcaccaaaatctttgaaactgcccttacagat
aagcaattaactaataaccgtgttaaaggtgtcattcgtcaagatatgattaaaaaacaa
caacaaagtgccaaattagacggtgaagaaaaggctaacgatgttgatgaagttttcagt
cttggtaagaacccttctgcaagaccaaagacaggttctacctatattttatcgactgaa
gtgagaaatattatgagggtgctcttcaaaaaggaacaagaaatcttacaatatgttttc
cactcaagaccgaaccttttaaggaaatctgtaactccggatgtattcttcatggaagtc
gttttagtaccaccaaccagattccgtcttccttctaaattaggtgaagaagttcatgaa
aatacccaaaatcaattgttatcaaaggttttaactacatctttactcattagagattta
aatgatgagatgtcaaatctacaaaaggataaagtttccgttgaggatagaagagtaatt
ttcagcaggttaatgaatgcctttgtgactattcaaaatgatgttaatagttttattgat
tcgacaaaggcacaaggaagtaccggtggtaaggtccctatcccaggtgtcaagcaagct
ctagaaaagaaggaaggtctgttcagaaaacacatgatgggtaagcgtgtcaaccatgct
gctcgttccgtcatttctccagaccctaacattgagactaacgaaattggtgttccacca
gtttttgcaactaaattgacttatccagaaccagttacctcttataatattgcagagtta
cgtcaagcggtaattaacggtcctgataaatggccaggtgctacccaaattcaaaatgaa
gacggtagtttggtttcattggttggtatgactttagagcagcgtaatgccttggcaaat
caactattgacaccatcatccaacccagctacccacactttgaacaagaaggttttccgt
cacatcaaaaatagagatattgtcattatgaatcgtcaaccaactttgcataaagcttct
atgatgggtcataaggttagagttctacctggtgagaagactttacgtcttcactacgcc
aacactggtgcttataacgcagattttgatggtgatgaaatgaatatgcactttcctcaa
aatgaaaatgctagatctgaagcattcaacttggccaacacagattctcaatatttaaca
ccaacttcaggttcaccattaagaggtttgattcaagatcacatttctgctggtgtttgg
ttgaccaacaaggatagtttcttcacaagggatcaataccagcaatacatctacggttgt
attagacccgaggatggtcattctacaagaccaaaaattgtgactgtacctccagctgtt
atgaagccagtgccattgtggaccggtaaacaaatcattactactgtcataatgaatgtg
acgccagccgacatgccaggtattaatttactgtccaaaaacaaaatcaagaatgaatac
tggggccaaggttctactgaaaacgaggtcatcttcaaagatggtgcactattgtgtggt
attttggataaatctcaatatggtgcttctaaatacggtattgttcattctttacatgaa
gtctatggaccggaaactgctgcaaaagttctctctgtccttggtagactattcaccaac
tttatcacaaacaccgctttctcatgtggtatggatgacttacgtttgacagccgaaggt
aacaaggatagaaaggatttattgaagacgtctaccgatgttggtcgtcaagctgccgct
gaagtcaccaatttaccaactgatacaccatccaatgatcctgagcttttgaaaagattg
gaagaaatcttacgtgatgataacaaatcaggtattttggacgctgttacatcttctaag
gttaactcagttacatctaaagtggtctctactgtgattccaaagggtaccatgaagaaa
ttccctcaaaattccatgcaagccatggctttatctggtgctaaaggttccaccgttaat
gtttctcaaattatgtgtttgttaggtcaacaagccctagaaggtagaagagtgcctgta
atggttagtggtaagacactgccatcattcaaaccttttgaaacagactccatggctggt
ggttatatcaagggccgtttctactcaggtatcaagccacaggaatactactttcactgt
atggctggtcgtgaaggtttaattgataccgctgttaaaacctctagatctggttacttg
caacgttgtttaactaaacaattagaaggtattcatgtgtcttatgataacactgttagg
gatggtgacggtactttagtccaattcttatacggtggtgatgcggtggacactacaaaa
gaatcccatatgactcaattcgacttctgtctagaaaactacgatgcgttattgaggaaa
tacaatccttctgcactagtcgaacacttagacgtagaatctgccctcaaatactctaag
aaggctttgaagagtaggaagaagattgataaagaaccacattacaagaactcagataaa
tatgatcctgtattgtccaaatataacccagcaaaatacttgggttcagtctctgaaaag
ttccaagacaaattggagggctttttggattctcattcaaagcaattaaaactacattct
ggtataaatgaaaagaaattcagagctctgatgcagttaaaatacatgagatccttggtt
aaccctggtgaagctgttggtatcattgcagctcaatccgttggtgaaccttccacgcaa
atgaccttgaatactttccattttgctggtcacggtgctgctaacgttaccttaggtatt
cctcgtatgagagaaattgtcatgacagcatcagctgccattaagactcctcagatgtct
ctacctgtgtggaatcatgtgtctgatgaccaagctagtatcttctgtaaatccattacc
aaggttgtgctttctgaagttgtcgacaaggtcactgttaccgaaactacaggtgtttca
gaacacggtagcccagctcgttcctacgctgttcacatgaaattctacggtaaggatgca
tacggtgaagagtacgatgtttctaaggaagaattgcagaacgtcgttgcaacgaaattt
ttgtactatttggaaatggctatcgtcaaggaactcaagaaacaaaagaagacttccatg
cccgatattggtgttgctgtgcctaaatcgcaaaccgcattgggttcaggtgagggtcct
actagtggtagtaatgaggacaacgatgaggaagaagcgcgtcaaaaaaccaaacaagct
gtttcttatgaagaacctgatgaagatgaaatcgaaaccatgagacaagccgaaaagtca
tctgatgaggagggccttgactctgatatggattctggtgaatctgacaacgaatctgag
aaggacgaaaaggacgaagaggaagactctatcgagtctgccatgactgaggctaacaaa
aacatgagtaaatctcaacgtgatcgtcaacatgctgttatctcagaacacaaattcatt
accaagtacaattttgatgatgaagatggccaatggtgtaacttcaaattagaactttca
ggtgatactgaaaaattgttgatggtcaatattgtggaagatatctgtagaaaatccgtt
attagagaagttcctcacattagccgttgtattcctggtgaacctgtgggtgataggcgt
atgttgaccacggaaggtgtgaatttccaagcaatgtgggatcaagaaatgttcattgat
gtggatggtataagatccaacgatgttgcagctgttctacgcacttacggtgtggaagcg
gcaagaaataccattgtttacgaaatcaacaatgtgttttctcgttacgccattagtgtt
tctttccgtcatttggacttaattgctgatttaatgacaagacaaggtaactatttggca
ttcaatagacaaggtatggaaacctctacttcttcattcatgaagatgtcctatgaaact
acatgtcagtttttgaccaaggccgttctggacaatgatcgtgaaaaattgcaaagtcca
tctgcaagaatcgttttgggtaagttgaataacgttggtacgggagcttttgatgttttg
acgaagattccaaattctgtataa
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