Zygosaccharomyces rouxii: ZYRO0D07348g
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Entry
ZYRO0D07348g CDS
T01118
Name
(RefSeq) uncharacterized protein
KO
K18664
antiviral helicase SLH1 [EC:
5.6.2.6
]
Organism
zro
Zygosaccharomyces rouxii
Brite
KEGG Orthology (KO) [BR:
zro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zro03019
]
ZYRO0D07348g
Enzymes [BR:
zro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ZYRO0D07348g
Messenger RNA biogenesis [BR:
zro03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
ZYRO0D07348g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
DEXQc_Suv3
PhoH
Helicase_PWI
Motif
Other DBs
NCBI-GeneID:
8204007
NCBI-ProteinID:
XP_002496753
UniProt:
C5DVK1
LinkDB
All DBs
Position
D:complement(635079..640961)
Genome browser
AA seq
1960 aa
AA seq
DB search
MSATYSIHSAGSYMQAMQSMVNSSLSLAFDRTKSTVPKIDNELKLSKTPNVQAKMDQIRR
LANDGNEWDDVFQEFGDISYEKLKNVVESYGKVNSAATFKKLSRLIEDSSSPLPKDILLD
SVLDLVYSHEKTQLGKELLDLLGAENVELIDFLLQSRTEIVSQPKEHIIRMTDDAKNLPR
FLSQGDIKDQYNQNAFLAKNQKLDPAQKVVKYPHVYRKYEAGGSSMMALSGQKYTLPVGT
TRTSYQTYEEIIIPAADPDTNKRSFFIKLLKVKDLDHFCRQVFNYDTLNQVQSLVYPVAY
NTNENMLICAPTGAGKTDVALLTILNTVKQFATIDEDGEVNIDYDDFKIVYVAPLKALAA
EIVDKFQRKLEVFGIQVRELTGDMQLTKAEVIETQIIVTTPEKWDVVTRKGNGDDNLVSK
VKLLIIDEVHLLHEDRGSVIETLVARTLRQVESSQSMIRILGLSATLPNFMDVADFLGVN
RQVGMFYFDQSFRPKPLEQQLLGCRGKSGSKQCKENIDKVSYDKLLSMVEKGYQVMIFVH
SRKETVRSARTFIGMAQENHEIDLFAPDPIMKSRFTKDLGKNRDKDIKEIFQFGFGVHHA
GLARTDRNLTEKMFKDGAIKVLCCTATLAWGVNLPADCVIIKGTQVYDSKKGGFTNLGIS
DVIQIFGRAGRPGFGSAHGTGILCTSSDSLDEYVSLLTQQHPIESKFGSKLVDNLNAEIS
LGSVTNVDEAIQWLGYTYMFVRMRKNPFTYGIEWEELASDPQLYDRRRHLIVNAARRLHS
LQMIVFDEISMHFISKDLGRISSDFYLLNDSVEIFNQMCNAKATEADVLSMISYSSEFDG
VKFREEEATELSRLTDTAVECQVGGSVDTPQGKTNVLLQAFISQTRIMDSALASDSSYVA
QNSVRICRALFLIGMNRRWGKFSKVMLDICKSIEKRLWYFDHPLCQFELPENVVRQLRTK
NPSMEHLLELDADELGELVHNKKVGNKVFKLLNRFPKILIDAEIFPITTNVMRIHVELIP
DFAWDFQVHGNAEFFWVLVEESDKSEILHFEKFILNKKQLANKHEMDFMIPLSDPLPPQV
VVRVVSDTWIGCEYVHTLSFQHLIRPHNETLQTRLQRLRPLPTSALNNPLVESIYPFKYF
NPMQTMLFYTLYNTNENVFVGSPTGSGKTVIAELAMWHAFRDFPGKKIVYIAPMKALVRE
RVDDWRKKITPVTGDRVVELTGDSLPDPRDVRDSTIVITTPEKFDGISRNWQTRRFVQDV
SLVIMDEIHLLASDRGPILEMIVSRMNYISEQMHQPVRLLGMSTAVSNAYDMAGWLGVKN
NGLYNFPSSVRPVPLKMYIDGFPNNLAFCPLMKTMNKPAFMAIKQHSPNKPALIFVASRR
QTRLTALDLIHLCGLEDNPRRFLNVHDEEELRGYLSQVTDDTLRLSLQFGIGLHHAGLVE
KDRSISHQLFQENKIQILIATSTLAWGVNLPAHLVIIKGTQFFDSKIEGYRDMDLTDILQ
MMGRAGRPAYDTSGTSIVYTRENRKLFYKHFLNVGFPVESSLHKVLDDHLGAEISSGSVS
NKQEALDFLNWTFFFRRAHHNPTYYGITEDTTEAGVNEYLSELIDRTLDNLAESQCVEIF
GGDIEPTPFLSISSYYYISHKTIRQLLNQIHLNATFKDVLKWLSMAEEFNELPVRGGEMI
MNVEMSAQSRYPAEKTFTGDQEMTMLDPHVKAFLLLQAYMSRADLPIADYVQDTVSVLDQ
SLRILQAYIDVAAELGYYPVVMTIIKVMQCVKQGYWYEDDSVGILPGCNLKRRTDIEFSE
QGFAIEDSDAKPRLTLEDLGKMGHKKLTSVMEKFQVDQEQRREFLNVCQRLPVLDSINFE
DESRDSLIMTAKHFSNKNNKNFEVYCDAFPKMQKELWFVIAYKGQELLMLKRCQPKIQNK
ETIIVCDLVVPEDLKGQKLNFMIINDALDLSYQCEHQLLS
NT seq
5883 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcgacttattcaattcattctgctggctcttacatgcaggccatgcaatctatg
gtcaactcctctctatcgctggcctttgacagaacaaaatcaacagtgccgaaaattgac
aatgagttaaagctgagtaaaactccaaatgttcaagccaagatggaccagatacgccgt
ctcgctaacgatggtaatgaatgggatgatgtttttcaggaatttggtgatatatcctat
gagaagctgaaaaatgtggtggaatcttatggtaaagttaattcagcagctacgttcaaa
aaattatccagactgatagaagatagttctagtccattacctaaggatattttgctagat
tcggtgctagatctagtttattcccatgagaagacgcagttaggtaaagaattgttagat
ttgttaggagcagagaacgtggaattgatagattttttactacaatctagaactgagata
gtatcccaacctaaagagcatattattcgtatgactgatgatgcaaagaacctgccgagg
ttcttgtctcagggggatattaaagatcaatataatcagaatgcatttttagctaaaaac
caaaaattggaccccgcccaaaaagtggtcaagtacccccatgtttataggaaatacgaa
gctgggggatcgtctatgatggcattgtcaggtcaaaaatacacattacctgtcggaacc
acgagaacgtcgtatcaaacttatgaagagattattattccggccgccgacccagataca
aacaaaaggtcttttttcatcaaattactcaaagtcaaagatttggaccatttttgtaga
caggtgtttaattatgacacgcttaaccaagttcagtcgctggtgtatcctgtggcatac
aataccaatgaaaatatgttgatttgtgctcccacaggtgccggtaagacagatgtggct
ctattaaccattttgaacacggtcaagcaatttgcaactattgacgaagacggtgaagtc
aacatcgattatgatgattttaagattgtctatgttgcgccattaaaggctcttgccgct
gaaatcgttgataaatttcaaagaaagttagaagtgtttggcatacaagttcgagaatta
acaggtgatatgcaattaaccaaagctgaagtgattgaaacacaaatcattgttacaact
cccgaaaaatgggatgttgtaactcgtaaggggaacggtgatgacaatttggtatccaag
gtcaaattgttgattatcgatgaggtgcatttactgcatgaagacagaggttctgtcata
gaaactttggttgcaagaactctgagacaagtggaaagttctcaatcgatgattcgtatc
ctgggtctatctgccactttaccgaatttcatggatgtagctgattttctgggagttaat
cgtcaagtcggtatgttctactttgatcagtcatttcgtcctaaaccattagaacagcag
ctgttgggctgtagaggtaaatctggtagtaaacagtgtaaagaaaacatagacaaggta
tcctatgataagctgctatctatggtggaaaaaggatatcaagtaatgatttttgttcat
tcaagaaaagaaacagtaagaagtgctcgcacttttattggtatggctcaagagaaccat
gaaatcgacctttttgcaccagatcccatcatgaagagtagattcaccaaagatctgggt
aagaacagggacaaggacatcaaagaaattttccaatttggatttggtgttcatcatgca
gggctggctcgtacagatcgtaatttaactgaaaagatgtttaaagatggtgcaatcaaa
gttctatgctgtaccgctacattggcttggggtgttaatttgcccgcagattgtgtcatc
attaagggtacccaagtttacgattctaagaagggtggtttcacaaatttaggtatctca
gatgtgatccaaatctttggtcgtgccggtagacctggttttggatctgctcatggtact
ggtattctgtgtacttcgagcgattctctagatgagtatgtttccctgttgactcaacaa
catccaatagaatccaaattcggctccaaacttgtggataacctgaatgctgaaatttcc
ttaggtagcgtcaccaatgtggatgaagctatacagtggctgggttatacatacatgttt
gtaagaatgaggaaaaacccattcacatatggtattgaatgggaagaattggcttctgat
ccacaattatacgaccgaagaaggcatttaatagtgaatgcagctagaagattgcattcg
cttcaaatgattgtattcgacgagatttccatgcatttcatttccaaagatttggggaga
atttcctctgatttctatttgctaaacgattctgttgaaatcttcaaccagatgtgcaac
gccaaggctactgaagccgatgtcctatccatgattagttacagcagcgaattcgatggt
gtaaagtttagagaggaagaagctacggagttatcgagattaactgataccgctgtagag
tgtcaagtgggtggttcagtcgacactccgcaagggaaaaccaacgtcttacttcaggca
tttatctcccaaacccgtattatggattcagctttagcatctgactcaagttatgtagct
caaaattccgtgaggatttgtcgtgccttattcttaattggtatgaacagaagatggggt
aagttttctaaggtaatgctagatatttgcaagtccattgagaaaaggttatggtatttt
gatcatccactgtgtcagttcgaattaccagaaaacgttgtccgccaactgagaaccaag
aatcccagtatggaacatttattagagttagatgcagacgagctcggtgaacttgtgcat
aataaaaaagtcgggaataaggtattcaaacttttgaataggtttcccaagatcctcatc
gatgctgagattttcccaataacaacaaatgtcatgagaattcatgtggagttaattcca
gattttgcttgggatttccaagtacatggcaacgccgagttcttctgggttctagtggaa
gaatctgataaatcagagatattgcattttgaaaagtttatcctcaataaaaagcaatta
gccaacaagcatgagatggatttcatgatacccctttcggatcctttgccgccacaagtt
gtggtgagagtggtctcagatacttggattggctgtgaatatgtgcacacactatcattc
caacatttaatcagacctcacaacgaaacgttacaaacaagattacaaagattaagacct
ttgccaacttccgccttgaataatccactggtggaatcgatttatccgttcaaatatttc
aaccccatgcaaaccatgcttttctatacattgtacaacaccaacgaaaacgtattcgtg
ggttctccgacaggttcaggtaaaactgtgatagcagagcttgcaatgtggcatgcattt
agggattttccaggcaagaaaattgtatacattgcccccatgaaagctttggtccgcgaa
agagttgacgattggaggaaaaagatcacccctgtcactggagacagggttgttgagttg
actggtgattctttgccagatcctcgtgatgttcgtgattccactatcgttattaccaca
cctgaaaagtttgatggtatttcacgtaactggcagacccgtcgattcgttcaagacgta
tcccttgttatcatggatgaaatccatctattggcaagtgatcgtggtcctattttagag
atgattgtcagtcgtatgaactacatttcagaacagatgcaccaaccggtcaggttgctc
ggtatgtcaactgctgtttcgaatgcctatgatatggctggatggttaggagtcaaaaat
aatggcctttataatttcccatccagtgtccgtcctgttcctttgaagatgtacattgat
ggattccctaacaatctggcattctgtcccttgatgaagacgatgaacaaaccggctttc
atggcgattaaacaacattcccctaacaagccagcattgattttcgttgcctctcgtaga
caaacaaggttgacagccctagatttaattcacctatgtggtttggaagataatcctaga
agatttttgaacgtacacgacgaagaggagctgcgtggttacctctctcaggtaactgac
gatactttgagattatcactacaatttggtatcggattgcatcatgcaggtttagtggag
aaggatcgttctatctcacatcagttgttccaggagaacaagattcaaattttgatcgcc
acttccaccttggcatggggtgttaatttaccagcacatttagtaattatcaagggtacg
cagtttttcgattctaaaattgaaggctatagagatatggatttgactgatattctgcaa
atgatgggtagagctggtagacctgcttatgatacttcaggtacatccattgtttacacg
agggaaaacaggaaattgttttacaagcatttcttgaatgtagggttccctgttgaatct
tctttgcacaaggttttggatgaccacttgggtgctgaaatttcttcaggatctgtttcc
aacaagcaagaggcattagacttcttgaattggacattctttttccgtagagcacatcat
aatccaacctattatggaatcaccgaggatactactgaggcaggtgttaatgaatatttg
agtgaattgatcgatagaactttagataatttggcggaatctcaatgtgtggaaatcttt
ggaggtgacattgaacctacaccattcttgagcatttcctcatactattatatttcacac
aagacaattcgtcaattgttgaatcaaatccatctgaatgctacatttaaggatgttcta
aagtggttatcgatggctgaagaattcaacgagttacctgtgagaggtggtgaaatgatc
atgaatgtagagatgtctgctcaatcaaggtatcctgcagagaagacatttactggtgat
caagaaatgactatgttggatcctcacgtgaaagcctttttattattacaggcgtatatg
agccgcgcagatttacccattgcagattatgtgcaagatacggtttctgtattggatcaa
tctttgcgtattttgcaagcttacatcgatgttgctgctgaattaggttattatccagtg
gttatgacgatcatcaaagtgatgcaatgcgtcaagcaaggctattggtatgaagatgac
tctgtaggcatcttaccaggctgcaacttgaagaggcgcaccgatatagagtttagtgaa
caaggttttgctatagaagattctgacgctaaaccaaggttaacacttgaagatttgggt
aagatgggtcataagaagttgacatcagtgatggagaaattccaagtggatcaagaacaa
agacgcgaattcttaaatgtctgtcagaggttgcccgtcctagattctattaattttgaa
gatgagtccagggactctttaatcatgactgcaaagcattttagtaacaagaataacaaa
aattttgaagtctactgtgatgccttccctaagatgcaaaaggagttatggtttgttatt
gcctataaaggccaagagttattgatgttgaaaagatgtcagcccaagattcaaaacaag
gaaactatcatagtttgcgatctagtggtgcctgaagacttaaaggggcaaaagttgaac
ttcatgataattaatgatgccctagatctaagttaccagtgtgagcatcaactactatct
tga
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