KEGG   Zygosaccharomyces rouxii: ZYRO0D07348g
Entry
ZYRO0D07348g      CDS       T01118                                 
Name
(RefSeq) uncharacterized protein
  KO
K18664  antiviral helicase SLH1 [EC:5.6.2.6]
Organism
zro  Zygosaccharomyces rouxii
Brite
KEGG Orthology (KO) [BR:zro00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zro03019]
    ZYRO0D07348g
Enzymes [BR:zro01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     ZYRO0D07348g
Messenger RNA biogenesis [BR:zro03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    eIF4F and regulatory proteins
     ZYRO0D07348g
SSDB
Motif
Pfam: Sec63 DEAD SNRNP200_wHTH ResIII Helicase_C AAA_22 DEXQc_Suv3 PhoH Helicase_PWI
Other DBs
NCBI-GeneID: 8204007
NCBI-ProteinID: XP_002496753
UniProt: C5DVK1
LinkDB
Position
D:complement(635079..640961)
AA seq 1960 aa
MSATYSIHSAGSYMQAMQSMVNSSLSLAFDRTKSTVPKIDNELKLSKTPNVQAKMDQIRR
LANDGNEWDDVFQEFGDISYEKLKNVVESYGKVNSAATFKKLSRLIEDSSSPLPKDILLD
SVLDLVYSHEKTQLGKELLDLLGAENVELIDFLLQSRTEIVSQPKEHIIRMTDDAKNLPR
FLSQGDIKDQYNQNAFLAKNQKLDPAQKVVKYPHVYRKYEAGGSSMMALSGQKYTLPVGT
TRTSYQTYEEIIIPAADPDTNKRSFFIKLLKVKDLDHFCRQVFNYDTLNQVQSLVYPVAY
NTNENMLICAPTGAGKTDVALLTILNTVKQFATIDEDGEVNIDYDDFKIVYVAPLKALAA
EIVDKFQRKLEVFGIQVRELTGDMQLTKAEVIETQIIVTTPEKWDVVTRKGNGDDNLVSK
VKLLIIDEVHLLHEDRGSVIETLVARTLRQVESSQSMIRILGLSATLPNFMDVADFLGVN
RQVGMFYFDQSFRPKPLEQQLLGCRGKSGSKQCKENIDKVSYDKLLSMVEKGYQVMIFVH
SRKETVRSARTFIGMAQENHEIDLFAPDPIMKSRFTKDLGKNRDKDIKEIFQFGFGVHHA
GLARTDRNLTEKMFKDGAIKVLCCTATLAWGVNLPADCVIIKGTQVYDSKKGGFTNLGIS
DVIQIFGRAGRPGFGSAHGTGILCTSSDSLDEYVSLLTQQHPIESKFGSKLVDNLNAEIS
LGSVTNVDEAIQWLGYTYMFVRMRKNPFTYGIEWEELASDPQLYDRRRHLIVNAARRLHS
LQMIVFDEISMHFISKDLGRISSDFYLLNDSVEIFNQMCNAKATEADVLSMISYSSEFDG
VKFREEEATELSRLTDTAVECQVGGSVDTPQGKTNVLLQAFISQTRIMDSALASDSSYVA
QNSVRICRALFLIGMNRRWGKFSKVMLDICKSIEKRLWYFDHPLCQFELPENVVRQLRTK
NPSMEHLLELDADELGELVHNKKVGNKVFKLLNRFPKILIDAEIFPITTNVMRIHVELIP
DFAWDFQVHGNAEFFWVLVEESDKSEILHFEKFILNKKQLANKHEMDFMIPLSDPLPPQV
VVRVVSDTWIGCEYVHTLSFQHLIRPHNETLQTRLQRLRPLPTSALNNPLVESIYPFKYF
NPMQTMLFYTLYNTNENVFVGSPTGSGKTVIAELAMWHAFRDFPGKKIVYIAPMKALVRE
RVDDWRKKITPVTGDRVVELTGDSLPDPRDVRDSTIVITTPEKFDGISRNWQTRRFVQDV
SLVIMDEIHLLASDRGPILEMIVSRMNYISEQMHQPVRLLGMSTAVSNAYDMAGWLGVKN
NGLYNFPSSVRPVPLKMYIDGFPNNLAFCPLMKTMNKPAFMAIKQHSPNKPALIFVASRR
QTRLTALDLIHLCGLEDNPRRFLNVHDEEELRGYLSQVTDDTLRLSLQFGIGLHHAGLVE
KDRSISHQLFQENKIQILIATSTLAWGVNLPAHLVIIKGTQFFDSKIEGYRDMDLTDILQ
MMGRAGRPAYDTSGTSIVYTRENRKLFYKHFLNVGFPVESSLHKVLDDHLGAEISSGSVS
NKQEALDFLNWTFFFRRAHHNPTYYGITEDTTEAGVNEYLSELIDRTLDNLAESQCVEIF
GGDIEPTPFLSISSYYYISHKTIRQLLNQIHLNATFKDVLKWLSMAEEFNELPVRGGEMI
MNVEMSAQSRYPAEKTFTGDQEMTMLDPHVKAFLLLQAYMSRADLPIADYVQDTVSVLDQ
SLRILQAYIDVAAELGYYPVVMTIIKVMQCVKQGYWYEDDSVGILPGCNLKRRTDIEFSE
QGFAIEDSDAKPRLTLEDLGKMGHKKLTSVMEKFQVDQEQRREFLNVCQRLPVLDSINFE
DESRDSLIMTAKHFSNKNNKNFEVYCDAFPKMQKELWFVIAYKGQELLMLKRCQPKIQNK
ETIIVCDLVVPEDLKGQKLNFMIINDALDLSYQCEHQLLS
NT seq 5883 nt   +upstreamnt  +downstreamnt
atgtcagcgacttattcaattcattctgctggctcttacatgcaggccatgcaatctatg
gtcaactcctctctatcgctggcctttgacagaacaaaatcaacagtgccgaaaattgac
aatgagttaaagctgagtaaaactccaaatgttcaagccaagatggaccagatacgccgt
ctcgctaacgatggtaatgaatgggatgatgtttttcaggaatttggtgatatatcctat
gagaagctgaaaaatgtggtggaatcttatggtaaagttaattcagcagctacgttcaaa
aaattatccagactgatagaagatagttctagtccattacctaaggatattttgctagat
tcggtgctagatctagtttattcccatgagaagacgcagttaggtaaagaattgttagat
ttgttaggagcagagaacgtggaattgatagattttttactacaatctagaactgagata
gtatcccaacctaaagagcatattattcgtatgactgatgatgcaaagaacctgccgagg
ttcttgtctcagggggatattaaagatcaatataatcagaatgcatttttagctaaaaac
caaaaattggaccccgcccaaaaagtggtcaagtacccccatgtttataggaaatacgaa
gctgggggatcgtctatgatggcattgtcaggtcaaaaatacacattacctgtcggaacc
acgagaacgtcgtatcaaacttatgaagagattattattccggccgccgacccagataca
aacaaaaggtcttttttcatcaaattactcaaagtcaaagatttggaccatttttgtaga
caggtgtttaattatgacacgcttaaccaagttcagtcgctggtgtatcctgtggcatac
aataccaatgaaaatatgttgatttgtgctcccacaggtgccggtaagacagatgtggct
ctattaaccattttgaacacggtcaagcaatttgcaactattgacgaagacggtgaagtc
aacatcgattatgatgattttaagattgtctatgttgcgccattaaaggctcttgccgct
gaaatcgttgataaatttcaaagaaagttagaagtgtttggcatacaagttcgagaatta
acaggtgatatgcaattaaccaaagctgaagtgattgaaacacaaatcattgttacaact
cccgaaaaatgggatgttgtaactcgtaaggggaacggtgatgacaatttggtatccaag
gtcaaattgttgattatcgatgaggtgcatttactgcatgaagacagaggttctgtcata
gaaactttggttgcaagaactctgagacaagtggaaagttctcaatcgatgattcgtatc
ctgggtctatctgccactttaccgaatttcatggatgtagctgattttctgggagttaat
cgtcaagtcggtatgttctactttgatcagtcatttcgtcctaaaccattagaacagcag
ctgttgggctgtagaggtaaatctggtagtaaacagtgtaaagaaaacatagacaaggta
tcctatgataagctgctatctatggtggaaaaaggatatcaagtaatgatttttgttcat
tcaagaaaagaaacagtaagaagtgctcgcacttttattggtatggctcaagagaaccat
gaaatcgacctttttgcaccagatcccatcatgaagagtagattcaccaaagatctgggt
aagaacagggacaaggacatcaaagaaattttccaatttggatttggtgttcatcatgca
gggctggctcgtacagatcgtaatttaactgaaaagatgtttaaagatggtgcaatcaaa
gttctatgctgtaccgctacattggcttggggtgttaatttgcccgcagattgtgtcatc
attaagggtacccaagtttacgattctaagaagggtggtttcacaaatttaggtatctca
gatgtgatccaaatctttggtcgtgccggtagacctggttttggatctgctcatggtact
ggtattctgtgtacttcgagcgattctctagatgagtatgtttccctgttgactcaacaa
catccaatagaatccaaattcggctccaaacttgtggataacctgaatgctgaaatttcc
ttaggtagcgtcaccaatgtggatgaagctatacagtggctgggttatacatacatgttt
gtaagaatgaggaaaaacccattcacatatggtattgaatgggaagaattggcttctgat
ccacaattatacgaccgaagaaggcatttaatagtgaatgcagctagaagattgcattcg
cttcaaatgattgtattcgacgagatttccatgcatttcatttccaaagatttggggaga
atttcctctgatttctatttgctaaacgattctgttgaaatcttcaaccagatgtgcaac
gccaaggctactgaagccgatgtcctatccatgattagttacagcagcgaattcgatggt
gtaaagtttagagaggaagaagctacggagttatcgagattaactgataccgctgtagag
tgtcaagtgggtggttcagtcgacactccgcaagggaaaaccaacgtcttacttcaggca
tttatctcccaaacccgtattatggattcagctttagcatctgactcaagttatgtagct
caaaattccgtgaggatttgtcgtgccttattcttaattggtatgaacagaagatggggt
aagttttctaaggtaatgctagatatttgcaagtccattgagaaaaggttatggtatttt
gatcatccactgtgtcagttcgaattaccagaaaacgttgtccgccaactgagaaccaag
aatcccagtatggaacatttattagagttagatgcagacgagctcggtgaacttgtgcat
aataaaaaagtcgggaataaggtattcaaacttttgaataggtttcccaagatcctcatc
gatgctgagattttcccaataacaacaaatgtcatgagaattcatgtggagttaattcca
gattttgcttgggatttccaagtacatggcaacgccgagttcttctgggttctagtggaa
gaatctgataaatcagagatattgcattttgaaaagtttatcctcaataaaaagcaatta
gccaacaagcatgagatggatttcatgatacccctttcggatcctttgccgccacaagtt
gtggtgagagtggtctcagatacttggattggctgtgaatatgtgcacacactatcattc
caacatttaatcagacctcacaacgaaacgttacaaacaagattacaaagattaagacct
ttgccaacttccgccttgaataatccactggtggaatcgatttatccgttcaaatatttc
aaccccatgcaaaccatgcttttctatacattgtacaacaccaacgaaaacgtattcgtg
ggttctccgacaggttcaggtaaaactgtgatagcagagcttgcaatgtggcatgcattt
agggattttccaggcaagaaaattgtatacattgcccccatgaaagctttggtccgcgaa
agagttgacgattggaggaaaaagatcacccctgtcactggagacagggttgttgagttg
actggtgattctttgccagatcctcgtgatgttcgtgattccactatcgttattaccaca
cctgaaaagtttgatggtatttcacgtaactggcagacccgtcgattcgttcaagacgta
tcccttgttatcatggatgaaatccatctattggcaagtgatcgtggtcctattttagag
atgattgtcagtcgtatgaactacatttcagaacagatgcaccaaccggtcaggttgctc
ggtatgtcaactgctgtttcgaatgcctatgatatggctggatggttaggagtcaaaaat
aatggcctttataatttcccatccagtgtccgtcctgttcctttgaagatgtacattgat
ggattccctaacaatctggcattctgtcccttgatgaagacgatgaacaaaccggctttc
atggcgattaaacaacattcccctaacaagccagcattgattttcgttgcctctcgtaga
caaacaaggttgacagccctagatttaattcacctatgtggtttggaagataatcctaga
agatttttgaacgtacacgacgaagaggagctgcgtggttacctctctcaggtaactgac
gatactttgagattatcactacaatttggtatcggattgcatcatgcaggtttagtggag
aaggatcgttctatctcacatcagttgttccaggagaacaagattcaaattttgatcgcc
acttccaccttggcatggggtgttaatttaccagcacatttagtaattatcaagggtacg
cagtttttcgattctaaaattgaaggctatagagatatggatttgactgatattctgcaa
atgatgggtagagctggtagacctgcttatgatacttcaggtacatccattgtttacacg
agggaaaacaggaaattgttttacaagcatttcttgaatgtagggttccctgttgaatct
tctttgcacaaggttttggatgaccacttgggtgctgaaatttcttcaggatctgtttcc
aacaagcaagaggcattagacttcttgaattggacattctttttccgtagagcacatcat
aatccaacctattatggaatcaccgaggatactactgaggcaggtgttaatgaatatttg
agtgaattgatcgatagaactttagataatttggcggaatctcaatgtgtggaaatcttt
ggaggtgacattgaacctacaccattcttgagcatttcctcatactattatatttcacac
aagacaattcgtcaattgttgaatcaaatccatctgaatgctacatttaaggatgttcta
aagtggttatcgatggctgaagaattcaacgagttacctgtgagaggtggtgaaatgatc
atgaatgtagagatgtctgctcaatcaaggtatcctgcagagaagacatttactggtgat
caagaaatgactatgttggatcctcacgtgaaagcctttttattattacaggcgtatatg
agccgcgcagatttacccattgcagattatgtgcaagatacggtttctgtattggatcaa
tctttgcgtattttgcaagcttacatcgatgttgctgctgaattaggttattatccagtg
gttatgacgatcatcaaagtgatgcaatgcgtcaagcaaggctattggtatgaagatgac
tctgtaggcatcttaccaggctgcaacttgaagaggcgcaccgatatagagtttagtgaa
caaggttttgctatagaagattctgacgctaaaccaaggttaacacttgaagatttgggt
aagatgggtcataagaagttgacatcagtgatggagaaattccaagtggatcaagaacaa
agacgcgaattcttaaatgtctgtcagaggttgcccgtcctagattctattaattttgaa
gatgagtccagggactctttaatcatgactgcaaagcattttagtaacaagaataacaaa
aattttgaagtctactgtgatgccttccctaagatgcaaaaggagttatggtttgttatt
gcctataaaggccaagagttattgatgttgaaaagatgtcagcccaagattcaaaacaag
gaaactatcatagtttgcgatctagtggtgcctgaagacttaaaggggcaaaagttgaac
ttcatgataattaatgatgccctagatctaagttaccagtgtgagcatcaactactatct
tga

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