Zygosaccharomyces rouxii: ZYRO0D09042g
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Entry
ZYRO0D09042g CDS
T01118
Name
(RefSeq) DEAH-box RNA-dependent ATPase PRP2
KO
K12814
pre-mRNA-splicing factor ATP-dependent RNA helicase-like protein PRP2 [EC:
5.6.2.6
]
Organism
zro
Zygosaccharomyces rouxii
Pathway
zro03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
zro00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
ZYRO0D09042g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
zro03041
]
ZYRO0D09042g
Enzymes [BR:
zro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
ZYRO0D09042g
Spliceosome [BR:
zro03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
ZYRO0D09042g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_N
DEAD
HA2_C
AAA_22
AAA_19
nSTAND3
T2SSE
AAA_30
ABC_tran
PhoH
Flavi_DEAD
AAA_16
ResIII
Cwp6_N
NB-ARC
Motif
Other DBs
NCBI-GeneID:
8204084
NCBI-ProteinID:
XP_002496827
UniProt:
C5DVS5
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All DBs
Position
D:776116..778812
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AA seq
898 aa
AA seq
DB search
MSAADTGGDEHFQTGKGKRRTKRTFESHDGNNEKPLDDNDELQENGKPLVQPLDGITEDV
DEMKQLRLLARQRYLSHREREKLVILAKELEYLEQDIEKYGWENLTQSERDDITLKRDLV
SLIEHREDAGVQKFNLQEDYVNNEGKLDVERKKALLNDRSGYRQHEDEGKRKHMWEEKQL
RKAVKKDDDIDEIKLPGADKYEFVFDDNAMVDYEDEEEVLPGKDSEQDNHLLEQLEIEQK
RITSVQETRKFLPVYRYRKELLEAIKEHQILIIVGETGSGKTTQLPQYLVEDGYTQGGKF
QIAVTQPRRVAATAVAARVADEMDVVLGKEVGYSIRFEDKTTADKTILKYMTDGMLLREF
LVDPELQKYSCIMIDEAHERTLATDILLGLLKDILSHRKDMKLLISSATMNATKFSRFFN
NCPIFNVPGRRFPVDIHYTVQPEANYLHAVISTVFQIHTREPLPGDILVFLTGQDEIENM
AEKMEMIAGKLGEKAMPMIITPIYANLPQDQQNRIFIPTPPSCRKVVLATNIAETSLTVD
GIKYVVDPGYVKENSFVPSTGMTQLLTVPCSRASVDQRAGRAGRVGPGKCYRIFTKWSYY
NELELMPKPEVLRTNLSSVVLLLLSLGITNLVDFQLLDKPSVSSLSKSLENLYLLGALNS
KGTITKLGRIMCEFPCEPEFAKVLHTAATHEMCHGVLEECIDIVAMLHEAKSLFVGSKNP
NPGSHVVGQVDSDHMLYWEIYNEWRNSNYSKMWCQDHKLQYKTLCRVRNIRDQLFQCADK
LGLVALNESARRELVDKQANSALTARITKCFIGGFPMNVAQLGTNAYRTVGKKSTSGLDV
YIHPSSVVIHSTRDGKKPCKFVLYQQLMLTSKEFIRDCLPIPRESWLEEMVPQLFQSR
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgagtgctgcagatactggtggagatgaacattttcagactggtaaaggtaagagaaga
actaagaggactttcgaaagccatgatggcaataatgagaagccgctagacgataacgat
gagctacaagagaatgggaaacctttggttcaaccgctagatggtattacagaggatgtt
gatgagatgaagcaacttcgattactggctagacagaggtatttgagtcacagagaaagg
gaaaaattggttatacttgccaaagagttggaatacttagaacaagatattgagaaatac
ggttgggagaacttgacccaaagcgaaagggatgatattactttgaaaagagatttggtt
tcattgattgaacaccgagaggatgctggagttcaaaagttcaatttacaagaagactat
gtgaacaatgaaggtaagttggatgttgagagaaagaaggcattattgaatgatagaagt
ggatatcgccaacatgaggatgaaggtaaaaggaaacatatgtgggaagagaagcagttg
cgcaaggccgttaagaaggatgatgatatagatgagattaagcttcctggtgccgataaa
tacgaatttgtatttgatgataatgccatggtagactacgaggatgaagaagaagtgttg
cctgggaaggattctgagcaagataatcatttattagaacaattggaaattgagcagaaa
aggatcacttctgttcaggagacaaggaaattcttgccggtctatcgatatcggaaagaa
ttattggaagctatcaaagagcatcagattctaatcatagttggtgaaacaggttctggt
aagacaacacaactacctcagtacttagtagaggatggctatacgcaaggtggtaaattt
caaatcgcagtgacgcagccgcggagggtagcggctaccgctgtagcggcaagagttgca
gatgagatggacgtggtcttagggaaagaagtcggttattccatccggtttgaggataag
accacggcagataagactattcttaagtacatgacagatggtatgcttcttcgggagttt
ttagtggatccagaacttcagaaatattcttgcattatgatagatgaagcacatgagaga
acactagcgacggacatcttgttgggtttactcaaggatattttgtcgcatcgtaaggat
atgaagctactcatttcctctgcgaccatgaatgccactaaattctcacgattctttaac
aactgtcccatctttaacgttcctggtagaagatttccagtggatattcattatacggta
caacctgaagccaattatttgcatgcagttattagtacagttttccaaattcatacaagg
gagccattgccaggggacatcctagtatttttgactgggcaagatgaaattgagaacatg
gctgaaaagatggaaatgatagctggaaaattaggtgagaaggctatgcccatgataatt
actcctatctatgcaaatttaccacaggatcaacagaacaggatatttatacctacgccg
ccaagttgtaggaaagttgtattggcaaccaatattgctgaaacttctttgaccgtggat
ggtattaaatatgtggtagatccagggtacgttaaggaaaattcattcgtgccctctact
ggtatgacccagttgttaacggtaccttgttcgagagcatctgtggatcaaagagctggt
agagcaggtcgtgttggaccaggtaaatgttatcgaatatttaccaaatggtcatactac
aatgaactagaattaatgcctaagcctgaagtcttgaggactaatttatcatccgtggtt
ctacttttactatctctgggtattacgaatttagtcgatttccaattgttggataaacca
agtgtgtcttcgttgtccaaatctttggagaatttgtacttattaggagccctcaatagc
aaaggtactatcacaaaactgggtagaattatgtgtgaatttccttgcgaaccagaattc
gctaaagtgttacatacagccgctacacatgagatgtgccatggggtgcttgaggagtgc
atagatattgttgccatgctccatgaagccaaatctttgttcgtaggatctaaaaatcca
aatcccggctctcatgtcgttggacaagtcgatagtgaccacatgctctactgggagatc
tataatgaatggagaaattccaactattcgaagatgtggtgtcaggaccataaattacag
tacaagaccctttgcagggtgcgaaacattagagatcaattgttccaatgtgcagataaa
ttgggacttgttgctctcaacgaatcggctcgcagggaattggtagataagcaggccaat
tctgctctcactgccaggataactaaatgtttcattggtggattccccatgaacgtcgca
caacttggcacgaatgcctaccgtacggtgggcaaaaagagcaccagcggactagatgtc
tatatacacccttcgagcgttgttatccattctacaagagacggcaaaaagccatgcaaa
tttgtgctgtaccaacaactaatgcttacttctaaggagtttataagggattgtctacca
atccctagggagtcgtggttagaagaaatggtcccgcaactgtttcagagtcgttaa
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