Zygosaccharomyces rouxii: ZYRO0D10582g
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Entry
ZYRO0D10582g CDS
T01118
Name
(RefSeq) uncharacterized protein
KO
K14327
regulator of nonsense transcripts 2
Organism
zro
Zygosaccharomyces rouxii
Pathway
zro03013
Nucleocytoplasmic transport
zro03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
zro00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
ZYRO0D10582g
03015 mRNA surveillance pathway
ZYRO0D10582g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
zro03019
]
ZYRO0D10582g
Messenger RNA biogenesis [BR:
zro03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
ZYRO0D10582g
mRNA cycle factors
P-body specific factors
ZYRO0D10582g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G
Upf2
Ig_TRAPPC10
GED
Motif
Other DBs
NCBI-GeneID:
8204153
NCBI-ProteinID:
XP_002496895
UniProt:
C5DVZ3
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All DBs
Position
D:join(889961..889966,890039..893152)
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AA seq
1039 aa
AA seq
DB search
MDDERRLELSELNTRAWNGEEVFPLKQAKLDSSIKRNTGFIKKLKLGITKDSKASLLKDL
SEVSLEKYLSEIINTTDEGLQNVPNKNDDVAAVVEVISGLHQRFNTRFTCELMALFLNHF
ACPQEDSISEKEASTRVSKMRTNVRIFTELYLVGIFNSLDNVTSKDALPVFLRKRLAKKE
SVLVSILKEVLSFNFNDGFSSSIATLFVKKFPQLFEENNLADKYIHDKDLKYLLQGIFKK
FTEVVSARAVQLNKRTKKLIKEHQKCQIRTGKETDDFLEEYNATLPQYEKFKSAALVLTE
FFKLDPPELNEEVEAQEDEAAKPSVITNATGVSPSQKVWENDEVRKFYEALPNIDEIHDQ
SLKNNADPAGDKVNNFFRELEEADTKEAIDHLSVLYWSENLDNKATRKRLMKFFIENKDW
SKLRLYSRFFATNSKYFHELIEEFVNYVDSGFRSQLHSSKINVKNIIFFSEMVKFMQLPI
YLIFHKIRTLIINLHVPNNIEILTVLFEHLGIFLINKPEYKAHMEKMMALLKEKKRDRQL
SINLKGAMDNLITLVYPPSIKSLNASTKELSPEQQFYHILIRRELQSFEVGRVVKLLRRA
HWKDETVRDTLFDLFVRPEELSYQNISIMAKVLSELYKYQRNFVITCIDELLEKVERGLE
INDFTHSMHRVAEVRYLTELYSFALIKPNVLLDTMYLILKYGHNGKGSYLFSPNDIDEAD
NYFKIQLLSTMLLNLRRNTSMLSKKLPLFLRFYEYYTFTKEQPLPQETQFSLQTTFQKYE
DEDGFERSSTLQESAVRLTSMVKSLSGAQGDVTKETSSTNLTKTNSGADSSEDESDDEDE
EELSGVDDTVEDVEEEADGEEDESDEDDEESEEDEDGEDEDADSEDEDDSYRDVVADRDI
EQKRMYDEYQAKLKDENERKMEDELEQQLQKMMQDSMDSRKNEKIASAKIPLVGANKTNS
NFVAEPTETEGNEQESRIAGQQPKRVAFTFLNKSGKKTQSRTLRLPSNVDFVSGVLEEEE
RLKNEREKIKNIVLQRAFD
NT seq
3120 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgaacgaaggttagagcttagcgagcttaacaccagagcgtggaacggagag
gaagtatttcccttaaagcaagccaaacttgactccagtatcaagagaaatactggtttt
atcaagaagttaaaattgggtattacgaaggattcaaaggcatcattgttgaaagatctg
agcgaagtatctttggaaaaatatctttcagagatcattaatacaaccgatgagggctta
caaaatgtacctaacaagaatgatgatgtagctgcagttgttgaggtgattagtggctta
caccagagattcaatactagatttacatgtgagttaatggcactatttttgaaccatttt
gcatgtccacaggaggattctatttctgagaaagaagcatctactcgtgtgagcaaaatg
aggaccaacgttcgaatttttacagagttgtacctcgtgggtatattcaactccctggac
aacgtaacttcaaaggatgccctaccggtttttctgaggaaaagattggctaaaaaagaa
tcagttttggtgagtatcctaaaggaagtcttaagttttaactttaacgatggattctct
tctagcattgcgactctttttgtgaagaaattcccacaactgtttgaagaaaacaattta
gcagataaatacatccatgacaaggatttgaaatacttgcttcaagggattttcaaaaaa
tttaccgaagttgtatctgccagggctgtacagttgaataaaaggaccaagaaattgatc
aaagaacatcaaaaatgtcaaattcgtacaggtaaggaaacagatgatttcttggaagag
tacaatgcgactctaccacagtatgaaaaattcaaaagtgcagctttagtccttacggag
tttttcaaattagatcctccagaattaaacgaagaagtcgaagcacaggaggatgaagcc
gctaaaccatctgtaattacaaatgcaacgggtgtctctccaagtcaaaaagtttgggaa
aatgatgaagttagaaaattttacgaagctttgcccaacattgatgaaattcatgatcag
tcccttaaaaacaatgctgatcctgcgggtgataaagtgaacaatttctttagagaattg
gaggaagctgacacgaaggaggctattgatcatttgtccgtattgtactggtctgaaaat
ctggacaataaggcaactaggaaacggttgatgaaatttttcattgaaaacaaagattgg
agtaaattaagactatactctcgattctttgccactaattcgaagtacttccacgaattg
atagaagaatttgtgaattatgtggacagcggattccgtagtcaattgcactctagcaag
ataaatgtgaagaatattatctttttttctgagatggtaaaattcatgcaattgccaatc
tacctcattttccacaaaataagaacgttgataatcaacctccatgtaccgaataatatc
gaaatcttaacggtgttatttgagcatttgggtatctttctaatcaacaagccagagtac
aaggctcacatggagaagatgatggcattattgaaagagaagaaaagagatagacaactc
agcataaatttaaaaggtgccatggacaatttaataactttggtgtacccaccttcgatt
aagtctctaaacgcatctaccaaggaactctcacctgagcagcaattctatcatattctt
attaggagagaattgcaaagtttcgaagtgggacgtgtggtcaaattgctgcgtagggcc
cattggaaggatgaaactgtcagagatacacttttcgatctctttgtaagaccagaggag
ttgtcttaccaaaatatatccattatggccaaagtgttgagtgaactgtacaaataccaa
aggaatttcgtcataacctgtatcgatgaattgttggaaaaagttgaaagagggttggag
attaacgatttcacgcacagcatgcatagggttgcggaagttagatatttaacagagctt
tacagttttgcgttgattaaacccaatgtccttttggataccatgtatctcattttgaaa
tatgggcataacggcaagggatcttatctgttcagccccaatgacattgatgaagctgat
aattatttcaagattcaattgttgtcgaccatgctattaaatctacgaagaaacacttcc
atgttgagtaagaaactaccgcttttcttgcgtttctatgagtattatactttcacgaag
gagcagcccctgccacaagagacacagttcagcttacagaccactttccaaaaatacgag
gacgaagatggctttgaaagatctagtaccttgcaagagagtgctgtaagactaacctcc
atggtgaagtcattgagtggcgcacaaggcgatgtgacaaaggaaacttcaagcaccaat
ttgacgaagaccaattcgggagcagactcttctgaagacgaaagtgacgacgaggacgaa
gaggaattgagtggagtagatgatactgtagaagacgtagaggaggaagctgacggcgaa
gaagatgaaagtgatgaagatgacgaagaaagcgaagaagacgaagatggtgaagatgaa
gacgcagatagtgaagatgaggacgatagctatagagacgttgtggctgacagagatatt
gagcagaagagaatgtatgatgaataccaagctaaattaaaggatgaaaatgagcgtaaa
atggaagacgagttggagcaacaattgcagaagatgatgcaggattctatggactcgaga
aagaatgagaaaatcgcaagtgccaagattcctctggtcggcgcgaataaaactaattcc
aactttgttgccgagccgacggaaactgaaggcaatgaacaggagtctcgcattgcaggc
caacagcctaagcgggtcgcctttaccttcttaaacaagtccggtaagaaaacgcagtcg
cgtacgctaagattaccatccaacgtggattttgtatcgggagtgcttgaagaggaggaa
agattgaagaatgagcgtgagaagatcaagaacatcgttttgcaaagggcatttgactaa
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