Zygosaccharomyces rouxii: ZYRO0D11770g
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Entry
ZYRO0D11770g CDS
T01118
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
zro
Zygosaccharomyces rouxii
Pathway
zro03020
RNA polymerase
zro03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
zro00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ZYRO0D11770g
09124 Replication and repair
03420 Nucleotide excision repair
ZYRO0D11770g
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
zro03021
]
ZYRO0D11770g
03400 DNA repair and recombination proteins [BR:
zro03400
]
ZYRO0D11770g
Enzymes [BR:
zro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ZYRO0D11770g
Transcription machinery [BR:
zro03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
ZYRO0D11770g
DNA repair and recombination proteins [BR:
zro03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
ZYRO0D11770g
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
Motif
Other DBs
NCBI-GeneID:
8204206
NCBI-ProteinID:
XP_002496945
UniProt:
C5DW43
LinkDB
All DBs
Position
D:complement(987020..990694)
Genome browser
AA seq
1224 aa
AA seq
DB search
MSAAAVDEDYYAEDPYGYEDENFPITAEDSWAVISAFFREKGLVSQQLDSFNQFVDYTLQ
DIISEDSTLILEQLAQHTTESDNISRKYEISFGKIYVTKPMVNESDGVTHALYPQEARLR
NLTYSSGLFVDVKKRTHEAVDIPGRELKYEMIAEESENDSDSGKVFIGRLPIMLRSKNCY
LSDATESDLYKLKECPFDMGGYFIINGSEKVLIAQERSAGNIVQVFKKAAPSPISHVAEI
RSALEKGSRFISTLQVKLFAREGNSSRTIKATLPYIKQDIPIVIIFRALGIIPDGEILEH
ICYDVNDWQMLEMLKPCVEDGFVIQDRETALDFIGRRGTALGIKKEKRIQYARDILQKEF
LPHITQLEGFESRKAFFLGYMINRLLLCALDRRDQDDRDHFGKKRLDLAGPLLAQLFKTL
FRKLTRDIFRYMQRTVEEAKDFNMKLAINAKTITSGLKYALATGNWGEQKKAMSSRAGVS
QVLNRYTYSSTLSHLRRTNTPIGRDGKLAKPRQLHNTHWGLVCPAETPEGQACGLVKNLS
LMSCISVGTDPMPIITFLSEWGMEPLEDYIPHQSPEATRVFVNGVWHGVHRNPARLMETL
RTLRRKGDINPEVSMVRDIREKELKIFTDAGRVYRPLFIVDDDETLNRKELRIRKGHISK
LMATEYQDIEGGFEDSEEYTWTSLLNDGLVEYIDAEEEETILISMQPEDLEPVQENTFNE
DDDDLARRIKATHHATTFTHCEVHPSMILGVAASIIPFPDHNQSPRNTYQAAMGKQAMGV
FLTNYNVRMDTMANILYYPQKPLGTTRAMEYLKFRELPAGQNAIVAIACYSGYNQEDSMI
MNQSSIDRGLFRSLFFRSYMDQEKKYGMSITETFEKPQRTNTLRMKHGTYDKLDDDGLIA
PGVRVSGEDIIIGKTTPISPDEEELGQRTAYHSKRDASTPLRSTENGIVDQILITTNQDG
LKFVKVRVRTTKIPQIGDKFASRHGQKGTIGITYGREDMPFTAEGIVPDLIINPHAIPSR
MTVAHLIECLLSKVAALSGNEGDASPFTDITVEGISKLLREHGYQSRGFEVMYNGHTGKK
LMSQIFFGPTYYQRLRHMVDDKIHARARGPMQVLTRQPVEGRSRDGGLRFGEMERDCMIA
HGAAAFLKERLMEASDAFRVHICGICGLMSVVAKLNHNQFECRGCDNKIDIYQIHIPYAA
KLLFQELMAMNITPRLYTDRSKDF
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atgagtgccgccgctgtagacgaggactactatgccgaagatccttatgggtatgaagat
gagaactttcctattaccgcagaggattcatgggcagtgatatctgcattcttcagagag
aaaggtcttgtctctcaacagttggattcgtttaaccagtttgtggattacacattacaa
gatattattagtgaggattctacattgatattagaacaactagcacaacatactacagaa
tctgataatataagtcggaagtatgaaattagtttcggtaaaatctatgtgacgaaacct
atggttaatgaatccgatggtgtcacacatgctctttacccacaggaggcacgtctacgt
aacttaacttattcctcaggtcttttcgtcgatgttaaaaagagaactcatgaagctgta
gatataccaggaagggaactgaaatatgagatgattgctgaggaaagtgaaaatgatagt
gatagtggtaaagttttcattggtcgtttaccaatcatgttaagatcgaagaactgttac
ttgagtgatgctacggaatcagatctttacaagttgaaagaatgtccatttgatatgggt
ggttattttattatcaatggttctgaaaaggtgttgatcgctcaggagagatctgcaggt
aacattgttcaggtctttaagaaagcagcaccttcaccaatttctcatgtggcagaaatt
agatcagctttagaaaaggggtcacgttttatcagtactttacaagttaagctttttgct
agggaaggtaattcttcacgtaccatcaaggcaacactgccttacattaaacaagatatc
ccaattgttattatctttagagcattgggtatcatcccggatggtgaaattctagagcac
atttgttatgacgttaatgattggcagatgttagaaatgttaaaaccatgtgtggaagat
gggtttgtgattcaagatcgtgaaactgcgctagattttatcggtcgtcgtggtaccgcc
cttggtatcaaaaaggagaaaagaattcaatacgcaagagacattttacaaaaggagttt
ttaccacacattactcagttggaaggttttgaaagtagaaaggcgtttttccttggttat
atgatcaacagattactattatgtgcattagatcgtagagaccaggatgaccgtgatcat
ttcggaaagaaaagattggacctggctggtccactgttagcccaacttttcaaaacgctt
ttcagaaaattaactagagatatcttccggtacatgcaaagaactgtggaagaagcaaaa
gactttaatatgaaattggctatcaatgccaagactattacttcaggtctcaagtacgct
ttagccactggtaactggggtgaacaaaagaaagccatgtcatcaagagctggtgtttct
caagttttgaatcgttatacctattcttcaacgctatctcatttgagaagaacaaatact
cctattggtcgtgatggtaaactagctaaaccccgtcaattgcataatacccattggggg
ttggtttgtcctgcagaaactcctgaaggtcaagcttgtgggttggttaaaaacttatca
ttaatgtcgtgtatttccgttggtacggacccaatgcccattatcaccttcttgagtgaa
tggggtatggaacccttagaagattatattccacatcaatctccagaggcaacaagagtc
tttgttaacggtgtatggcatggtgtccatagaaatccagctagattaatggaaaccctg
agaaccttgagaagaaaaggtgatatcaatccggaagtttccatggttagagatattcgt
gaaaaggaattgaaaatctttacagatgctggtagagtgtataggccacttttcattgta
gatgatgatgaaacgctaaatcgtaaggaactgagaataagaaaaggacacatttctaaa
ttaatggctacggaatatcaggacatcgaaggtgggtttgaagattcagaagaatatacc
tggacctcgttgttaaacgatggtttggtggaatacattgatgcagaagaagaggaaaca
attttaatttctatgcaaccagaagatttagaacccgtacaagaaaatacttttaatgaa
gacgatgacgatttggcaagacgtataaaggcgactcaccatgctacgacttttacacac
tgtgaagttcacccatctatgattcttggtgtggctgcatctattattccattccctgat
cataaccaatctcctcgtaacacttatcaagctgctatgggtaaacaggcaatgggtgta
ttcttaaccaattacaacgttcgtatggataccatggctaacattttgtactatccccaa
aagcctctggggactacacgtgccatggaatacttgaaattcagagaattacccgctggt
caaaatgctattgtggccattgcatgttactctggttacaatcaagaggattccatgatt
atgaatcaatcctctattgatagaggtcttttcagatcgttattctttagatcctacatg
gatcaagaaaagaaatacggtatgtctattaccgaaacttttgagaagcctcaacgcaca
aacactttaagaatgaaacacggtacttatgataaattagatgacgatggattaattgcc
ccaggtgttagagtatctggtgaagatattatcattggtaaaacaacacctatttctcct
gatgaagaggaattaggtcaaagaactgcataccattctaaacgtgatgcctccacgcca
ttaagaagcacagaaaatggtattgtggatcaaattttaatcactacgaaccaggatggg
ttgaaatttgttaaagttcgtgtgagaactaccaagatcccacaaatcggtgataaattt
gcatctcgtcacggtcaaaagggtaccattggtattacctatggtagagaagatatgcca
tttactgctgaaggtattgtacctgatttgatcatcaaccctcatgccattccatctcgt
atgacagtcgcgcatttaatcgaatgtctattgagtaaagttgcagcattgtctggtaat
gaaggtgatgcttctccatttacagatattactgtggagggtatatcgaaactacttcgt
gaacacggttatcaatctcgtggttttgaagtcatgtacaatggtcatactggtaagaaa
ttaatgtcacaaattttctttggccccacatactaccaacgtctaagacacatggtagat
gacaagattcatgcaagagctcgtggtccaatgcaagttctaacgagacaacctgttgaa
ggtagatcaagagacggtggtttaagattcggtgagatggagcgtgattgtatgattgcg
cacggtgcagctgctttcctaaaggaaagattaatggaagcatctgatgccttcagagtt
cacatttgtggtatttgtgggttgatgagtgttgtagctaaattgaaccacaaccaattc
gaatgcagaggttgtgataataagattgatatttatcaaatccacatcccatatgccgcc
aaattgcttttccaagaattgatggcaatgaatatcacaccacgtctgtacaccgataga
tcaaaagacttttga
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