KEGG   Zygosaccharomyces rouxii: ZYRO0D11968g
Entry
ZYRO0D11968g      CDS       T01118                                 
Name
(RefSeq) mRNA splicing protein SME1
  KO
K11097  small nuclear ribonucleoprotein E
Organism
zro  Zygosaccharomyces rouxii
Pathway
zro03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zro00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    ZYRO0D11968g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zro03019]
    ZYRO0D11968g
   03041 Spliceosome [BR:zro03041]
    ZYRO0D11968g
   03032 DNA replication proteins [BR:zro03032]
    ZYRO0D11968g
Messenger RNA biogenesis [BR:zro03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    U7-dependent histone pre-mRNA processing factors
     ZYRO0D11968g
Spliceosome [BR:zro03041]
 Complex A
  U1 snRNP components
   Sm proteins
    ZYRO0D11968g
  U2 snRNP components
    ZYRO0D11968g
 Complex B
  U1 snRNP components
    ZYRO0D11968g
  U4/U6.U5 tri-snRNP components
    ZYRO0D11968g
 Complex C
  U2 snRNP components
    ZYRO0D11968g
DNA replication proteins [BR:zro03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     ZYRO0D11968g
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 8204215
NCBI-ProteinID: XP_002496954
UniProt: C5DW52
LinkDB
Position
D:1015205..1015486
AA seq 93 aa
MSTGSKSVIPPINCIFGFLQQQTVVTFWLFEQLGTRIRGKISGFDEFMNVVIEDATEIPV
DPQTGKEHLDRGKKLGKILLKGDNITLITSVDQ
NT seq 282 nt   +upstreamnt  +downstreamnt
atgtctacaggctctaagtcggttataccacccatcaattgtatatttggatttcttcag
cagcaaactgtggttactttttggttatttgagcaattgggtaccagaataagaggtaaa
attagcgggtttgatgaatttatgaatgtagttattgaggatgctacagagattccagtg
gatcctcagacaggtaaagaacatttagatagagggaaaaagcttgggaaaattctgttg
aaaggggacaatataactttaatcacttcagtggatcaataa

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