KEGG   Zygosaccharomyces rouxii: ZYRO0D12364g
Entry
ZYRO0D12364g      CDS       T01118                                 
Name
(RefSeq) mRNA splicing protein SYF1
  KO
K12867  pre-mRNA-splicing factor SYF1
Organism
zro  Zygosaccharomyces rouxii
Pathway
zro03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:zro00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    ZYRO0D12364g
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:zro03019]
    ZYRO0D12364g
   03041 Spliceosome [BR:zro03041]
    ZYRO0D12364g
Messenger RNA biogenesis [BR:zro03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     ZYRO0D12364g
Spliceosome [BR:zro03041]
 Complex B
  Other components
   Prp19-related factors
    ZYRO0D12364g
 Complex C
    ZYRO0D12364g
SSDB
Motif
Pfam: HAT_Syf1_CNRKL1_C HAT_PRP39_C HAT_Syf1_CNRKL1_N HAT_Syf1_M TPR_15 TPR_19
Other DBs
NCBI-GeneID: 8204231
NCBI-ProteinID: XP_002496970
UniProt: C5DW68
LinkDB
Position
D:1037070..1039499
AA seq 809 aa
MDCISRYVVDEEDVAFEYELQRTPLSIVTWKRYLEKWETQRRPLSHLVWLYERFCRQFAD
QEDIWCNYLRWIVNQRQFDTLTVYRRFIQILEGFSTGCEELCMLMMEFATSEYQLEMIRH
ILDVSLRKLGVESHWKIWEMIFKFLEEKMLPLTEFGDSQDEYQDEQEQMEALIYKSLFGE
EEEQDTPDLWSSNILQRYIKIAPNWNLQDSLQKLASTRDYNAVHNFYQRYLNHGNELKAT
LEIPFPLQLNYLEALDRLQLDEKYQSFLQQLQTLFPGKSVDFSIMWAKHEIKRSRFHHVT
EILENAMSSTLDLKSFTTIYEFESLFERLYLENVVEELKSNPDLQKDALEKFELSAHLSR
LQNLIETHSLRLNDLRLRQNPNSVETWRHRATLFQTIKDKCNVYAEAILAIDASKVFVPG
SLATIWCEHAALYWNAKAFDTAKEIWDRALRVPFPHLKDLETIWISWTEHELAENGIKKG
LEILETALKVPDAPEKILEKYKKSGKRVPAQAIIFTSLALWSFYLDLQEASSIGQSDQVE
KTISIYETMIYLKVATPMHFIQYAHFLQDYTNDKIKGFQVYERALSFFPRETQYEIWSVY
LREATDPNAQLSTESVRDLFDHALEALVPSGIDCWPIFILYSDFEEKNGLAKRSVDILLK
GCRTRSRDSTFWEKCVSKAQRLLGGEAARPYYEECLQSIPNSKVIPQALAFAEMETQLGE
LNRAREILKYGAQLFHPSKNVELWEFWEEFELQNGDKESYKSMLKLRRTLESALTVNTEL
ESQKEGNVQFIAASQKKTPLNPEEIDLNI
NT seq 2430 nt   +upstreamnt  +downstreamnt
atggattgcattagccggtacgttgttgatgaagaggacgtagcgtttgagtacgagtta
cagaggactcctctgagtatagttacgtggaaaaggtatctggaaaaatgggaaactcaa
aggaggccattatcacatctagtgtggctatacgaacgattttgccgacagtttgctgat
caagaggatatctggtgtaattacctgcgatggattgtaaatcaacgacaatttgacacc
ttgactgtttaccgaaggtttattcagatccttgagggtttctctactggatgcgaagag
ctgtgcatgttaatgatggagtttgccacttctgaataccagttagagatgatacgccac
atcttagacgtttctctgagaaaattgggagtagagtctcattggaaaatttgggaaatg
atctttaagttcttggaggagaaaatgctaccattgacagaatttggtgatagtcaagat
gaatatcaagatgagcaggaacaaatggaggctttgatttacaagagtttgtttggtgaa
gaagaggagcaggatacacctgatctgtggtcgtcgaacattttgcaaaggtacatcaaa
atagcaccaaactggaatttgcaagattctttacaaaaattggcatctactagagattat
aatgctgtgcataatttttatcaacgatatttaaatcacggtaatgaattaaaagctaca
ttggaaataccgtttccattgcaattgaattacttggaagcactagaccgtttacaactg
gatgaaaaataccaatcatttttgcagcaattacaaacactcttccccggtaaatcagta
gatttttcgataatgtgggcaaagcatgaaattaaaagatctcgttttcaccatgtaact
gaaattttggaaaatgcgatgtcatcaactttggaccttaaaagtttcactacgatctac
gaatttgaatcattattcgaaagattgtatttggaaaatgtagttgaggagttgaaatct
aatccagatttgcaaaaagatgctctggagaaatttgaattaagcgctcacctatctcgt
ctgcaaaaccttatagagactcattcattaaggcttaacgacttaagattaaggcaaaat
ccgaattctgtagaaacttggcgtcatagagctacactcttccaaaccattaaagacaaa
tgcaatgtttatgcagaagccattttggcaattgatgcatcaaaagttttcgtaccaggt
tcattagcaactatttggtgtgaacatgccgcgttgtattggaacgcaaaagctttcgat
actgctaaagaaatatgggatagagcattaagagttccattccctcatttaaaagattta
gagactatttggatttcctggacagagcacgaattagctgaaaatggaattaagaaaggt
ttggaaatcctcgagaccgcactaaaagtgcctgatgctccggaaaagattctggaaaaa
tataagaaaagcggtaaaagggtacccgctcaagccattatattcacctcattagcactt
tggtcattctaccttgacttacaagaagcatcgagtataggtcagtcagatcaggttgaa
aagacgatttcgatatacgaaacaatgatttacctgaaagtggccacaccaatgcatttc
attcaatatgcacattttttacaggattacaccaacgataagataaaaggtttccaagta
tacgagcgtgcactttccttctttcccagagagactcaatacgaaatttggagcgtttac
ctgagggaggccactgatcctaatgcgcaactctctacagaaagtgtacgtgatttgttt
gatcatgcattggaggctttagtccccagcggaattgattgctggccaatctttattctt
tatagcgacttcgaagagaaaaacgggttagccaagagaagtgtagatattctactgaaa
ggttgccgtaccagaagtcgtgattcaaccttttgggaaaaatgtgtttctaaggcacaa
cgtcttttaggtggtgaagccgccaggccttattacgaagaatgtctacagagtataccg
aattccaaagtcattccccaagcgcttgcgtttgccgaaatggagactcaattaggtgaa
ttgaacagagcaagagaaattttaaaatatggtgctcaattgtttcacccatccaaaaac
gtcgaattatgggaattttgggaagaattcgaattacaaaatggtgataaggaatcttat
aagtcaatgttgaaattaagaaggacattagaaagtgcattaacggtcaacactgaatta
gaaagtcaaaaggaaggaaacgttcaattcatagcggcttctcaaaagaaaactccactt
aatcccgaagagattgatttgaatatataa

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